Metal Ion-Responsive Fluorescent Probes for Two-Photon Excitation Microscopy.

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Chem Mater. Author manuscript; available in PMC 2017 May 12. Published in final edited form as: Chem Mater. 2011 ; 23(3): 483–500. doi:10.1021/cm1021905.

Metal Ion-Responsive Fluorescent Probes for Two-Photon Excitation Microscopy S. Sumalekshmy and Christoph J. Fahrni* School of Chemistry and Biochemistry and Petit Institute for Bioengineering and Bioscience, Georgia Institute of Technology, 901 Atlantic Drive, Atlanta, Georgia 30332

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Abstract Metal ion-responsive fluorescent probes are powerful tools for visualizing labile metal ion pools in live cells. To take full advantage of the benefits offered by two-photon excitation microscopy, including increased depth penetration, reduced phototoxicity, and intrinsic 3D capabilities, the photophysical properties of the probes must be optimized for nonlinear excitation. This review summarizes the challenges associated with the design of two-photon excitable fluorescent probes and labels and offers an overview on recent efforts in developing selective and sensitive reagents for the detection of metal ions in biological systems.

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According to current estimates approximately 40% of the proteome is composed of proteins that require one or multiple metal ions for their proper function. Given the complex chemical composition of a cell or organism, a sophisticated machinery is required to guarantee the faithful insertion of metal ions into the respective metalloproteins. Although numerous genes and proteins have been identified that are involved in metal trafficking pathways, still little is known about the subcellular distribution and speciation of metal ions during normal cell function and alterations in specific diseases. Considering the small size of a single cell, it is apparent that the in situ detection of metal ions requires very sensitive microanalytical techniques with high spatial resolution. Among suitable imaging modalities, visible-light fluorescence microscopy is presumably the most cost-effective technique. It offers not only submicron spatial resolution but also excellent sensitivity down to the single molecule level. Because the biologically relevant metal ions are not fluorescent, a reporter molecule must be introduced that selectively binds to the metal ion of interest and signals its presence through a change in emission intensity or color. Because such a fluorescent indicator inevitably competes with other endogenous ligands for metal binding, this approach is not suitable to analyze the total metal ion content of a cell. Nevertheless, in the context of exploring metal ion trafficking pathways and signaling events, the metal ions of interest are inherently labile, and therefore, this apparent limitation becomes in fact a desirable feature for selectively probing this exchangeable metal pool. For example, fura-2, one of the first fluorescence metal indicators developed for the detection of Ca(II) ions in live cells, has revolutionized the understanding of Ca(II)-mediated signaling in neurobiology. Spurred by this initial

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Sumalekshmy and Fahrni

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success, many fluorescent indicators have since been developed for the detection of a broad range of metal ions, including even toxic heavy metals such as Hg(II), Pb(II), and Cd(II).,

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Over the past decade, the capabilities of fluorescence-based biological imaging have been further expanded by two-photon excitation microscopy (TPEM).– Originally invented by Webb and coworkers, this technique utilizes an ultrafast pulsed laser as excitation source, which leads to the simultaneous absorption of two photons by the fluorophore. Consequently, the excited state of a fluorophore can be accessed by absorption of two photons of half the energy compared to the one-photon process. Hence, many popular fluorophores used in bioimaging can be excited in the near-infrared region, which offers improved depth penetration in scattering media and reduced photo toxicity. Furthermore, two-photon absorption scales linearly with the squared intensity of the laser beam, such that excitation occurs only within a spatially confined volume at the focal point of the microscope objective. By acquiring images at equally spaced positions across the vertical axis of the specimen, a three-dimensional volume rendering can be constructed. These properties rendered this technique particularly attractive for biological imaging, and more recently, stimulated also the development of fluorescent metal ion indicators tailored towards TPEM applications. This review is intended to provide an overview of these recent efforts with an emphasis on the underlying photophysical principles used for the design of such metal responsive indicators.

2. Design Strategies for Cation-Responsive Fluorescent Indicators 2.1. General Principles

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Depending on the mode of fluorescence response, metal-ion indicators can be divided into two major classes. The first group undergoes a change in fluorescence intensity, either an increase or decrease upon binding of the metal ion, whereas the second group responds with a chromatic shift of the peak emission. Assuming a 1:1 stoichiometry for the complex formed between metal ion and indicator, the measurement of the fluorescence intensity F is principally sufficient to determine the free metal ion concentration according to equation (1)

(1)

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where Kd is the dissociation constant of the metal-indicator complex, and Fmin and Fmax are the minimum and maximum fluorescence intensities for the free and saturated probe, respectively, typically obtained from calibration experiments with metal-buffered solutions at a fixed indicator concentration. Because the latter may vary strongly from cell to cell and even within different regions of the cytoplasm, it is difficult to utilize fluorescence intensity measurements to obtain reliable quantitative information of intracellular metal pools. The data interpretation is further complicated through time-dependent photobleaching or accumulation of the indicator to intracellular compartments. These problems can be circumvented with indicators that undergo a spectral shift upon analyte binding. By measuring the ratio R of the fluorescence intensities at two excitation or emission

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wavelengths, the probe response can be directly related to the free metal ion concentration according to

(2)

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where Kd is again the dissociation constant of the metal-probe complex (with 1:1 stoichiometry), Rmin and Rmax are the minimum and maximum intensity ratios for the free and saturated probe, and Sf and Sb are instrument dependent calibration constants. In this case, fluorescence intensity differences due to uneven distribution, photobleaching, relocalization, or instrument dependent fluctuations are cancelled out. It is important to note that the ratiometric approach is still not entirely devoid of artifacts. Because the intensity ratio R reflects the fractional saturation of the indicator by the analyte, the indicator concentration should remain below the total amount of available analyte.

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While the limit of detection for both indicator classes depends, in the first place, on the thermodynamic affinity towards the metal cation of interest, the optical sensitivity relies on the brightness and detectability of the fluorescence change. Because it is easier to differentiate small differences in intensity rather than spectral changes, the dynamic range of intensity-based indicators is naturally larger, which may be particularly advantageous when attempting to monitor low analyte concentrations. In this sense, one type of indicator is not necessarily better than the other; each offers a distinct set of advantages and disadvantages that must be balanced in context of the application at hand. Regardless of the response mode, both indicator classes rely on efficient two-photon absorbing fluorophores that can be readily detected by TPEM. For this reason, we start our discussion with an overview of design strategies of two-photon absorbing fluorophores geared towards biological applications. 2.2. Two-Photon Absorbing Fluorophores

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Although fluorescent dyes and indicators commonly used in linear microscopy can be also applied in TPEM (see also section 3), there are two potential limitations. First, the fluorophore brightness, which is proportional to the fluorescence quantum yield and absorption cross section, may be compromised due to a low 2PA cross section. While the quantum yield is typically assumed to be independent of the excitation mode, the cross section follows different quantum mechanical rules for the nonlinear two-photon compared to one-photon process. Optimizing the two-photon absorption cross section is therefore critical to improving the optical sensitivity of organic fluorophores for TPEM. Second, the majority of ratiometric fluorescent probes commonly used in biological research undergo only a shift in the excitation but not emission profile. Given the significant costs of femtosecond-pulsed lasers, TPEM is restricted to a single excitation source, and for this reason, ratiometric probes that require rapid switching between two excitation wavelengths are not practical for TPEM.



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A number of strategies have been identified to maximize the 2PA cross section of fluorophores.– From a fundamental point of view, the 2PA cross section is proportional to the imaginary part of the second hyperpolarizability

(3)

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On a molecular level, δ(ω) can be maximized by combining three distinct structural elements: electron donating groups (D), electron accepting groups (A), and conjugated πbridges that connect the donor and acceptor components. As illustrated with Figure 1, depending on their spatial arrangement, simple dipolar (a), symmetrical quadrupolar (b), or more complex octupolar structures (c) can be envisioned. Moreover, the architectures are not limited to two-dimensional arrangements, but can be further expanded to complex 3D designs. Despite the structural diversity, all of these architectures are devoted towards maximizing the degree of charge transfer upon photoexcitation while maintaining a strong transition dipole moment. The structure-property relationships for the various design approaches have been extensively reviewed;– therefore, the following section only focuses on the key concepts and a few selected examples geared towards bioimaging.

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2.2.1. Noncentrosymmetric Dipolar Fluorophores—The attachment of an electronrich donor and an electron deficient acceptor group to a linear π-system typically results in an uneven, dipolar ground state charge distribution. Upon photoexcitation, such dipolar fluorophores undergo charge redistribution from the donor to the acceptor group to give a further polarized excited state with an increased dipole moment compared to the ground state. Applying a simplified two state model that only includes the electronic ground state S0 and the lowest excited state S1,, the peak cross section δmax at the two-photon resonance energy (2hν = E1) is related to the transition dipole moment M01 and the change in permanent dipole moment Δμ = μ1 − μ0 between ground and excited state according to equation (4)

(4)

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where Γ corresponds to a damping factor that represents the overall bandwidth of the S0 → S1 transition. The enhancement of the optical field in the medium relative to vacuum is described by L = (n2+2)/3, where n is the refractive index of the medium. The cross section δ is typically reported in units of Göppert-Mayer (1 GM = 10−50 cm4 s/photon), giving tribute to Maria Göppert-Mayer who developed the theory of two-photon absorption in the 1930s. From equation (4) it becomes evident that the two photon cross section increases with increasing charge transfer in the excited state, which is typically achieved by increasing the donor and acceptor strength of the terminal substituents. As the difference between



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donor and acceptor strength is increasing, the ground state increasingly resembles the charge-separated zwitter-ionic resonance structure II as illustrated with a simple D-A substituted stilbene π-system.

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If both resonance structures I and II contribute equally to the ground state, the so-called cyanine limit is reached for which the degree of π-bond alteration (BOA) is vanishingly small. Theoretical studies showed that the 2PA cross section peaks at an intermediate value of BOA; however, at such values the associated excitation energy E1 is very low and typically lies outside the spectral window of the Ti-sapphire laser used in TPEM. For this reason, finding the optimal combination of donor and acceptor strength for a given π-system is critical for maximizing the 2PA cross section of dipolar fluorophores for TPEM applications.

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Figure 2 shows a compilation of dipolar fluorophores that have been specifically developed as labels for biological multiphoton imaging. By using a fluorene core to bridge a diphenyl amino donor moiety and an electron deficient benzothiazole acceptor, a 2PA cross section of 202 GM (λ = 780 nm) was achieved with fluorophore 1a (Table 1). The utility of 1 for TPEM was demonstrated with rat cardiomyoblast cells, which showed predominantly cytoplasmic staining upon incubation with the dye. To explore the utility of 1a as biolabel, an amine reactive derivative 1b was synthesized and conjugated to bovine serum albumin (BSA). Featuring a further extended conjugation length, the 2PA cross section of fluorophores 2a and 2b improved to 248 GM (λ = 730 nm) and 563 GM (λ = 730 nm), respectively. Incubation of COS-7 and HCT 116 cells with 2a revealed a punctate staining pattern with a predominantly endosomal localization (Figure 3).

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Similar to 2b, chromophores 3a-c feature also a fluoroethynyl bridge to link a dialkylamino donor group with a range of pyridine dicarboxamide derivatives as electron acceptors., In dichloromethane, the parent compound 3a exhibits a large 2PA cross section of 1146 GM (λ = 830 nm). The attachment of hydrophilic substituents in 3b and 3c produced amphiphilic probes suitable for biological imaging. Whereas incubation of CHO cells with 3b yielded predominant staining of the plasma membrane, the pyrasonide substituted dye 3c readily crossed the cell membrane and revealed a cytoplasmic staining. The 2HBenzo[h]chromene-2-one core of derivatives 4 efficiently integrates a donor-acceptor pair in a co-planar orientation which facilitates the charge redistribution in the excited state. Depending on the nature of the acceptor, fluorophores 4a and 4b offer large 2PA cross sections of 350 (λ = 880 nm) and 470 GM (λ = 940 nm), respectively. Incubation of A431 cells with 4a showed rapid internalization and negligible toxicity, rendering 4a suitable for live cell imaging studies. To explore the utility of this fluorophore as a chemical tag for twophoton imaging in live cells, Cornish and coworkers synthesized the cell permeant conjugate 5 (TMP-BC575) containing a trimethoprim moiety (TMP) as targeting group. The TMP-



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modified fluorophore specifically binds to E. coli dihydrofolate reductase (eDHFR), a small 18kD protein that was expressed in HEP293 cells as fusion protein with a nuclear targeting sequence. Two-photon imaging with excitation at 940 nm revealed the exclusive localization of the label to cell nuclei. Despite having only a small conjugated π-system, the 1,5disubstituted naphthalene derivative 6 showed a remarkably high 2PA cross section of 92 GM (λ = 720 nm) in DMSO as solvent. Detailed cellular studies with Hep3B cancer cells revealed that 6 is cell permeant and capable of inducing apoptosis in a dose-dependent manner. It is important to note that all fluorophores exhibit significantly lower action cross sections in polar solvents such as DMSO or water (Table 1). With increasing solvent polarity, solvent-solute interactions become more prominent and offer non-radiative deactivation pathways that reduce the fluorescence quantum yield and thus brightness of dipolar fluorophores.

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2.2.2 Centrosymmetric Quadrupolar Fluorophores—In centrosymmetric fluorophores, two-photon excitation from the ground state S0 to the lowest excited state S1 is forbidden by dipole selection rules. Instead, the next higher excited state S2 can be accessed through a non-stationary “virtual” state. The two-photon cross section of this type of fluorophore can be approximated with a three state model that includes the relevant states S0, S1 and S2., Denoting the transition energies from the ground to the lowest excited and two-photon state as E1 and E2, respectively, the peak cross section δmax at the two-photon resonance energy (2hν = E2) can be expressed as a function of the transition dipole moments M01 and M12 according to equation (5)

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(5)

where Γ corresponds again to the damping factor that represents the overall bandwidth (full width at half-maximum) of the two-photon S0 → S2 transition. For many quadrupolar organic chromophore, Γ can be approximated with ≈ 0.1 eV. Because all static dipole moments are zero in a centrosymmetric D-A architecture, the dipole term as expressed by equation (4) remains absent.

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According to equation (5), structural modifications that increase the transition dipole moments M01 and M12 are expected to greatly increase the 2PA cross section. For example, the attachment of electron donating dibutylamino groups to stilbene 7 led to a nearly 20-fold increase of the 2PA cross section in 8, a landmark discovery that set the foundation for the rational design of 2PA fluorophores based on structure-property relationships.



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Quantum chemical calculations of 7 and 8 showed that M01 and M12 indeed increased from 7.1 to 8.8 D and 3.1 to 7.2 D, respectively. In addition, the donor substituents also exerted a favorable influence on the one-photon detuning term (E1-hν), which decreased from 1.8 to 1.5 eV, and thus contributed to the enhanced δ. Extension of the conjugation length and addition of electron withdrawing cyano substituents in fluorophore 9 yielded a 2PA cross section that was further enhanced by two orders of magnitudes compared to the parent compound 7. Since the initial discovery that centrosymmetric architectures can yield very large 2PA cross sections, a large number of quadrupolar two-photon fluorophores have been described, typically composed of two terminal donor or acceptor groups that are bridged through a conjugated π-system.,

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Given the large 2PA cross sections that can be achieved with a centrosymmetric arrangement of donor and acceptors, quadrupolar fluorophores should be well suited as labels for TPEM; however, as already noted for dipolar fluorophores, the action cross section also decreases for this fluorophore architecture substantially in polar solvents. Nevertheless, a number of quadrupolar fluorophores have been successfully developed as labels for biological multiphoton imaging (Figure 4). For example, 10a exhibits a maximum 2PA cross section of 160 GM (λ = 720 nm) in aqueous solution., Taking into account the excellent quantum yield of 0.72, this fluorophore is more than three times brighter compared to fluorescein. To improve the water solubility, the conjugated hydrocarbon core was functionalized with multiple oligoethyleneglycol chains. Despite the considerable molecular weight of 1.4 kD, 10a was readily taken up into live cells within 10 minutes and produced a perinuclear staining pattern. For comparison, the structurally related label 10b containing a biphenyl core exhibits both a lower 2PA cross section and quantum yield, thus underscoring the importance of a co-planar conjugatedπ-system with restricted conformational freedom., Fluorophores 11a and 11b contain a non-conjugated pyrazobole core, which could be



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readily utilized for the design of other centrosymmetric donor-donor 2PA systems. The boron containing moiety might serve as a building block of bifunctional molecules as labels for TPEM imaging and sensitizers for boron neutron capture therapy (BNCT). Despite their lipophilicity, both fluorophores were rapidly internalized by HeLa cells and displayed vesicular staining and some residual cytosolic fluorescence (Figure 5). Fluorescence lifetime imaging studies revealed a decay time that was comparable to organic solvents, indicating a hydrophobic cellular environment.

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Structurally related to the dipolar fluorophores 2 and 3, centrosymmetric 12b also showed a substantially increased 2PA cross section compared to 12a due to the additional conjugation length provided by the alkynyl spacers. Presumably due to aggregation effects, the 2PA efficiency of 13a in water was up to three times higher compared to aprotic solvents. Conjugation with a cyclic peptide RGDfK yielded 13b which selectively targeted integrin glycoproteins located at the plasma membrane. Composed of a [2.2]paracyclophane core to bridge two distrylbenzene fragments, an exceptionally high 2PA cross section around 700 GM (λ = 700 nm)was achieved with fluorophore 14 in aqueous solution. The study also demonstrated that the 2PA cross section does not necessarily increase with stronger donor substituents. In fact, weaker donors appear to be the better choice for applications in polar solvents, since the reduced dipole strength of the excited fluorophore results in weaker solvent-solute interactions, thus improving the quantum yield and overall brightness.

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2.2.3. Metal Complexes—A range of metal ions has been utilized as templates to assemble a variety of three-dimensional multipolar structures (Figure 6). The electropositive metal center can induce strong intraligand charge transfer states with increased polarization compared to the free ligand. Following this design approach, the bis-cinnamaldiminato Schiff base Zn(II) complex 15 was synthesized and exhibited a very large 2PA cross sections around 10,000 GM (λ = 890 nm). Because the 2PA properties of 15 were determined by the open-aperture Z-scan technique, an approach that tends to enhance the apparent 2PA cross section due to excited state absorption (ESA) or thermal lens effects, a direct comparison with data obtained from two-photon excited fluorescence measurements is difficult. Theoretical investigations demonstrated a direct dependence of 2PA cross section on the Lewis acidity of the metal center used for complex formation. By using a donor-substituted bipyridine as ligand, the octupolar complexes 16a and 16b were assembled. Compared to the free ligands, the Zn(II) complex exhibited an almost 3-fold increase of the 2PA cross section from 69 (λ = 760 nm) to 214 GM (λ = 895 nm) in case of 16a, and from 190 (λ = 730 nm) to 530 GM (λ = 820 nm) for 16b. Independent investigations of the photophysical properties of 16a revealed even larger values of 860 GM (λ = 965 nm), determined by the Z-scan technique, and 1018 GM (λ = 900 nm) according to two-photon excited fluorescence measurements. Compared to the free ligand, the 2PA cross section of the terpyrdine Zn(II) complex 18 increased 2-fold from 96 GM to 186 GM. Consistent with strongly increased excited state polarization upon Zn(II) coordination, the emission maximum shifted to lower energy from 413 nm to 549 nm in toluene as solvent. The tridentate ligands 17a and 17b formed well-defined complexes with 1:2 metal-ligand stoichiometry with a range of metal ions. Compared to the free ligands, the 2PA cross sections were strongly enhanced and



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reached maxima of 2600 (λ = 800 nm) and 2730 GM (λ = 850 nm) in case of the Zn(II) complexes with ligands 17a and 17b, respectively. Despite the large 2PA cross sections that were achieved through metal-enhanced excited state polarization, the kinetic lability of the metal complexes, especially in case of Zn(II), Ca(II), and Mg(II), precludes their application as biolabels. More recently, octupolar lanthanide complexes have been reported that are sufficiently stable in aqueous solution, thus offering an attractive avenue for developing new labels for biological TPEM., For example, the water-soluble Eu(III) complex with ligand 19 showed 2PA cross section of 92 GM (λ = 700 nm) and was successfully loaded into fixed T24 cancer cells (Figure 7). 2.3. Metal-Responsive Fluorescent Probes

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To design a metal-responsive fluorescent indicator for TPEM, the fluorescence output of a two-photon absorbing fluorophore must be manipulated in a metal-dependent manner. This can be principally accomplished in two different ways; either by influencing the 2PA cross section upon metal binding or by altering the course of excited state deactivation pathways. In the first case, metal binding would typically affect both the intensity and wavelength of the fluorescence emission, whereas in the second scenario only the fluorophore brightness would be altered.

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2.3.1. Photoinduced Charge Transfer Probes (PCT)—The terminal electron donating groups of dipolar and quadrupolar two-photon absorbing molecules discussed above offer a convenient way to directly integrate a metal binding site into the fluorophore structure. Because the excited state polarization and degree of charge transfer depend on the donor strength, metal ion binding is expected to directly influence both, the 2PA cross section and emission properties, of the fluorophore. This design strategy should be therefore suitable for the construction of simple intensity responsive probes as well as ratiometric indicators that undergo a spectral shift upon metal binding.

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Examples of centrosymmetric and pseudo-centrosymmetric metal-responsive indicators with a D-π-A-π-D scaffold are depicted in Figure 8 and their photophysical data are compiled in Table 3. In the absence of metal cations indicator 20 exhibits a 2PA cross section comparable to the dibutylamino substituted parent compound 9; however, upon saturation with Mg(II) ions the cross section at 810 nm decreased by two orders of magnitude from 2150 to 45 GM, resulting in an almost 50-fold reduction of the brightness. Quantum chemical calculations indicated that the pronounced loss of brightness is primarily a consequence of a strong metal-induced hypsochromic shift of the 2PA maximum from 1.9 to 2.2 eV rather than a loss of two-photon absorptivity across the entire spectral range. Contrary to the large hypsochromic shift of the absorption maximum, the peak emission moved only by 34 nm upon saturation with Mg(II), indicating a weakening of the interaction between the magnesium ion and the aniline nitrogen donor upon photoexcitation. Modified with two symmetrically arranged thioether receptors, the structurally related fluorescent indicator 21 responded with high selectivity towards Ag(I), which promoted efficient fluorescence quenching and a similar metal-induced reduction of the 2PA cross section. The centrosymmetric aminophenol triacetic acid (APTRA) derivative 22 showed an unexpected



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bathochromic emission shift upon saturation with Pb(II). Although APTRA was primarily used for the design Mg(II)-selective indicators, the response of 22 proved to be highly selective towards Pb(II) and showed no significant changes in the presence of excess amounts of Mg(II) or Ca(II). Furthermore, a surprisingly small reduction of the 2PA action cross section from 62 to 51 GM was reported.

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The presence of two metal-chelating units within the same indicator inevitably leads to solution equilibria composed of multiple coordination species, which make it challenging to deduce metal ion concentrations solely based on the emission response. By replacing one of the metal-binding receptors with a donor moiety that is similar in strength but does not interact with the metal cation, the indicator should largely retain its centrosymmetric electronic structure while eliminating the complications associated with multiple binding sites. For example, the pseudo-centrosymmetric indicator 23 showed indeed a similar 2PA cross section, and saturation with Mg(II) induced again a dramatic reduction from 1800 to 300 GM (λ = 810 nm), resulting in an almost identical action cross section compared to the centrosymmetric parent compound 20. The closely related compound 24 exhibited qualitatively the same behavior. Saturation with Ca(II) also led to a large decrease of the 2PA cross section from 120 (λ = 760 nm) to 20 GM (λ = 820 nm). In contrast to the Mg(II)induced spectral changes of 20 and 23, Ca(II) binding to 24 yielded only a shift in the absorption but not the emission spectrum. The bis(2-pyridyl)amine substituted indicator 25 exhibited strong two-photon induced emission when excited at 780 nm. Upon saturation with Zn(II), the 2PA action cross section was reduced from 14 to 4 GM (λ = 780 nm).

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Building upon 1,2-bis(aminophenoxy)ethane-N,N,N′N′-tetraacetic acid (BAPTA), a chelator originally used for the development of the first ratiometric Ca(II) indicator fura-2 (27), Dong et al. prepared the probes 26a and 26b featuring a pseudocentrosymmetric fluorophore architecture. While 26a showed only a modest 2PA cross section of 36 GM (λ = 800 nm), extension of the conjugation length improved the maximum absorption to 917 GM (λ = 890 nm) for 26b. Incubation of HeLa cells with 26b produced a bright punctate staining pattern as visualized by TPEM; however, upon extracellular stimulation with ATP, the fluorescence emission of 26b was completely quenched, presumably due to a drastic reduction of the 2PA cross section following a similar mechanism as discussed above for fluorophore 20. Characterization of fura-2 under two-photon excitation in aqueous buffer solution revealed a 2PA cross section of 12 GM (λ = 700 nm), which was not significantly altered upon saturation with Ca(II)., Although fura-2 features a simple D-π-A architecture, metal binding to the donor moiety similarly reduces the degree of charge transfer upon photoexcitation, which unfavorably impacts the 2PA cross section as discussed above. While centrosymmetric D-π-A-π-D fluorophores inevitably respond with a reduction of the fluorescence brightness upon binding of metal ions to the terminal donors, emission enhancements can be still achieved when resorting to a different sensing mechanism as recently demonstrated with the calix[4]arene-based indicator 28 (Figure 9). In absence of metal cations, the fluorescence of 28 is presumably quenched through an energy transfer mechanism. Upon binding of K(I) and Pb(II), the indicator emits with a quantum yield of



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0.1 and offers a large 2PA cross section of 998 GM (λ = 780 nm). Coordination of K(I) to the crown ether receptor is necessary to achieve the emission enhancement due to an allosteric effect.

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Compared to quadrupolar fluorophores, the 2PA cross section of dipolar A-π-D structures is typically lower. Nevertheless, the unsymmetrical architecture is better suited for the design of PCT indicators composed of a single chelator moiety, which can be readily attached to the terminal donor or the acceptor sites, thus eliminating the problems associated with multiple binding units. For example, the dipolar indicator 29 is composed of a 1,2,3-triazole-based chelator, which acts both as an electron donor of the PCT fluorophore and as a recognition site for selectively responding towards Zn(II) and Hg(II) ions. In the absence of metal ions, 29 exhibited a maximum 2PA cross section of 350 GM (λ = 820 nm, Table 4), which was lowered to 240 GM (λ = 820 nm) upon saturation with Zn(II). At the same time, the emission maximum was shifted to higher energy, an observation that is consistent with formation of a less polarized excited state due to metal-binding to the terminal donor.


Built upon the same fluorophore platform, indicator 30 displayed a selective response towards Zn(II) ions in THF and water/acetonitrile solution. In the former solvent, the 2PA cross section decreased from 130 to 65 GM (λ = 780 nm) upon Zn(II)-binding (Table 4), whereas in the latter the cross section remained essentially constant around 50 GM (λ = 780 nm). As observed for 29, the peak emission was blue-shifted by more than 30 nm upon saturation with Zn(II), rendering 30 potentially suitable for ratiometric imaging of Zn(II) in biological systems. Structurally related to the thioether-substituted centrosymmetric indicator 21, the dipolar structure 31 was designed as Hg(II)-responsive indicator. Maximum 2PA cross sections of 2700 GM and 840 GM (λ = 790 nm) were measured in toluene and in aqueous solution, respectively. Similar to the response of 21 towards Ag(I) ions, saturation of 31 with Hg(II) resulted in complete fluorescence quenching,



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All of the above examples utilize the terminal donor moiety as an anchor to integrate a metal-ion recognition site into the fluorophore structure. Because binding of the electropositive metal ion results in reduced donor strength, the 2PA cross section is inevitably lowered, which in turn reduces the brightness of the fluorescence emission. For biological TPEM imaging, however, it would be desirable to generate an increase rather than decrease in fluorescence contrast upon metal binding. This can be achieved with an alternate fluorophore design, in which the metal ion binds to the acceptor rather than donor moiety of the dipolar A-π–D scaffold. In this case, the excited state polarization is increasing upon metal binding, which should also yield an increased 2PA cross section according to equation 4. Most electron accepting groups traditionally used in dipolar fluorophores are poor Lewis bases and therefore not suitable for metal ion coordination; however, pyridine forms a wide range of coordination complexes and can act as an effective π-acceptor with similar strength compared to carboxylic acid esters. For example, the Zn(II)-responsive indicator 32 was designed following this approach. The molecule is composed of a electron-donating anisole substituent, which is linked to the electron-deficient tris(picolyl)amine Zn(II) receptor through an oxazole bridge. Upon saturation with Zn(II), the 2PA cross section increased from 31 (λ = 690 nm) to 77 GM (λ = 730 nm) and the emission maximum shifted from 441 to 497 nm, a significant spectral change suitable for ratiometric measurements. Contrary to fluorophores with a centrosymmetric D-π-A-π–D architecture, the fluorescence brightness increased rather than decreased upon Zn(II) binding. At wavelengths above 800 nm, the 2PA cross section is vanishingly small for the metal-free indicator but strongly enhanced upon Zn(II) binding, thus producing a very large fluorescence contrast of greater than 1:10,000.

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The structurally related compounds 33 and 34 were designed as probes for ratiometric pH measurements in aqueous solution., Protonation of the pyridine moiety significantly increases the acceptor strength, which in turn leads to a strongly red-shifted fluorescence emission and an increased 2PA cross section. For example, under neutral conditions the amino-substituted derivative 33a exhibited a maximum 2PA cross section of 15 GM (λ = 710 nm), which increased to 65 GM (λ = 800 nm) upon acidification to pH 2. At the same time, fluorescence emission was shifted from 465 to 530 nm upon protonation. Depending on the substituent in the 2-position, the pyrdine pKa can be adjusted over a wide range while maintaining the enhanced two-photon response. For example, derivative 33b lacking the hydrazine substituent has a pKa of 4.3, which is even further lowered to 2.6 and 1.8 in the ortho-substituted derivatives 34a and 34b, respectively. Chem Mater. Author manuscript; available in PMC 2017 May 12.


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The Mg(II)-selective indicator 35 is derived from the dipolar benzo[h]chromene label 4a discussed in section 2.2.1. The caboxylate group and neighboring carbonyl oxygen form a bidentate ligand, which functions also as an effective π-acceptor. Consistent with an increased excited state polarization upon binding with Mg(II), the maximum 2PA cross section was shifted to lower energy and increased from 290 (λ = 820 nm) to 382 GM (λ = 880 nm). With a binding affinity of 2.5 mM, the indicator was well suited for detecting Mg(II) ions in live cells and mouse hippocampal tissue (Figure 10). Featuring an octupolar architecure with three D-π-A branches, chromophore 36 showed also a strong Zn(II)-induced increase of the 2PA cross section. The increased excited state polarization of the Zn(II)-bound form was again responsible for a strongly red-shifted emission spectrum compared to the unbound fluorophore.


2.3.2. Photoinduced Electron Transfer Probes (PET)—As discussed in the previous section, photoexcitation of dipolar and quadrupolar molecules is associated with a large charge redistribution in the excited state. In addition, the open-shell electron configuration of the excited fluorophore is responsible for fundamentally altered redox properties. Compared to the ground state, the photo-excited state is both a better oxidant and reductant, a property that can be harnessed to modulate the fluorescence output in an analyte dependent manner through an electron transfer reaction. For this purpose, the metal-ion receptor must be electronically decoupled from the fluorophore π-system, otherwise photoexcitation would lead to formation of a simple charge transfer state as previously discussed. Hence, upon photoexcitation an electron transfer reaction can occur between the metal-ion receptor acting as the donor (D), and the excited fluorophore (F*) acting as the acceptor (Figure 11a). Because charge recombination of the intermediately formed radical ion pair (D•+–F•−) is typically a non-radiative process, photoinduced electron transfer (PET) usually results in quenching of the fluorescence emission. Metal coordination to the receptor is expected to render the PET process less favorably, which in turn leads to an emission increase (Figure 11b). Because the quenching electron donor is electronically decoupled form the fluorophore, this design strategy has the advantage that the 2PA cross section and emission energy are not significantly affected by metal binding. Based on this approach, Cho and coworkers have developed a broad range of fluorescent two-photon indicators that respond with an emission increase upon binding of the respective analyte (Figure 12).



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In all of these indicators a donor-acceptor substituted dipolar naphthalene scaffold serves as two-photon absorbing fluorophore, which was combined in a modular fashion with a wide range of receptors acting as PET donors. Depending on the nature of the sensing moiety, the two-photon action cross section of derivatives 37–43 ranged between 86 and 125 GM (λ = 780 nm) (Table 5). For example, fluorophores 37 and 38 were designed as pH responsive probes. The aniline moiety in 37a has a sufficiently low redox potential to quench the fluorescence emission through a PET mechanism. Upon protonation at low pH, the aniline donor is rendered electrochemically inactive and no longer quenches the emission of the naphthalene fluorophore, thus resulting in a 22-fold fluorescence emission increase. Substitution with a methoxy group further decreased the redox potential of the aniline donor, which resulted in more effective quenching and a 3-fold improved fluorescence enhancement factor of 64 for derivative 37b. The probe was successfully applied to visualize acidic compartments in macrophages using TPEM. The redox potential of the aliphatic amino group of 38 is too high for engaging in PET quenching; however, the probe is effectively trapped upon protonation in acidic compartments and was successfully used to label acidic vesicles, live macrophages and acute rat hippocampal slices. Given the favorable redox potential of BAPTA, the fluorescence of indicator 39 is also effectively quenched through a PET mechanism. The probe selectively responds to Ca(II) over other divalent metal ions and has been used to visualize calcium waves in astrocytes and acute rat hypothalamic slices. Similarly, the APTRA-functionalized indicator 41 exhibited a 15-fold fluorescence increase upon saturation with Mg(II) ions. The probe was readily loaded into live Hep3B cells and acute mouse hippocampal slices. With a dissociation constant of Kd = 2.5 mM the indicator was suitable for dynamically imaging changes in cellular Mg(II) concentrations. Hydrophobic fluorescent probes such as 38 and 41 tend to partition into cellular membranes. Because the encountered low polarity environment destabilizes the radical ion pair formed as an intermediate in the PET quenching process, the fluorescence quantum yield of hydrophobic PET indicators may increase simply due to membrane partitioning rather than analyte binding. This problem has been elegantly addressed by taking advantage of the polarity dependent emission spectrum of the dipolar naphthalene fluorophore. Live cell imaging studies revealed a blue-shifted emission maximum for the membrane-localized probes 38 and 41 compared to the charged metal-bound forms, which preferentially localized in the cytosolic environment. The artifact free detection of cellular Ca(II) and Mg(II) was readily accomplished by collecting only the lower-energy portion of the fluorescence emission, corresponding to the metal-ion dependent response of the cytosolically localized probe., Utilizing the environmental sensitive probe laurdan as fluorescent core, the indicators 44a and 44b were specifically designed for imaging Ca(II) fluxes near membranes in live cells., Compared to calcium green and fura-2, which were developed for linear microscopy, the indicators are 3-times brighter with two-photon excitation.



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The fluorescent indicator 40 responded with a 8-fold fluorescence enhancement upon saturation with sodium ions and was successfully utilized for imaging glutamate induced changes of intracellular Na(I) concentrations in astrocytes. Treatment with ouabain, a steroid hormone that inhibits Na+/K+ ATPases, led also to a dramatic increase of cytosolic Na(I). The selective detection of Zn(II) ions was accomplished with indicator 42a and 42b which contain N,N-di(2-picolyl)ethylenediamine (DPEN) as receptor moiety. As already discussed for the pH-sensitive indicators 37a and 37b, substitution with a methoxy group in 42b yielded more efficient quenching in absence of metal ions and a further improved fluorescence enhancement upon saturation with Zn(II). Indicator 42b proved to be useful for imaging labile Zn(II) stores in acute rat hippocampal slices as well as monitoring the release of endogenous Zn(II) pools upon stimulation of 293 cells with 10 mM S-nitrosocysteine. Despite the rather low fluorescence contrast, indicator 43 was successfully used for the quantification of Hg(II) ions in kidney, heart, liver, and gill tissue of oryzias latipes after exposure to 2 ppb Hg(II) for 1–3 days.

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2.3.3. Excited State Proton Transfer Probes—In some fluorophores, the electron redistribution in the photo-excited state leads to dramatic changes in the acidity or basicity of heteroatom substituents., For example, the acidity of 2-naphthol increases from pKa = 9.5 in the ground state to pKa* = 2.8 in the lowest excited singlet state. This change is sufficient to initiate a proton transfer to a nearby water molecule within the radiative lifetime of the excited state, thus giving rise to fluorescence emission from the deprotonated 2-naphtholate anion. Fluorophores in which the photo-acidic group is combined with a suitable proton acceptor may also undergo an excited state intramolecular proton transfer (ESIPT) reaction. By integrating the proton acceptor or donor moiety into a metal-ion chelator, the ESIPT process can be disrupted in a metal ion-dependent fashion to produce a change in fluorescence output (Figure 13).



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For example, benzazole substituted phenols 45 undergo an excited state intramolecular proton transfer (ESIPT) to yield the corresponding phototautomer T* as illustrated with the Jablonski diagram in Figure 13a. The proton transfer reaction usually occurs at such a fast rate that no fluorescence emission from the normal tautomer N* is observed. After radiative deactivation, the phototautomer thermally equilibrates back to its initial ground state. Upon coordination of a metal ion to benzazole scaffold, ESIPT is inhibited and the fluorescence emission now occurs at substantially higher energy (Figure 13b). In view of the large change in emission energy, this switching mechanism is particularly attractive for the design of emission ratiometric indicators.

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Figure 14 shows a few selected examples of fluorophores which utilize an ESIPT switching mechanism to produce a chromatic shift of the fluorescence upon Zn(II) coordination. Beside the expected photo-tautomer emission, 2-(2′-hydroxyphenyl)-benzimidazole derivative 46 produced also a higher energy band that was assigned to the presence of ground state rotamers. After replacing the hydroxy group with an arylsulfonamide as hydrogen bond donor, the formation of rotamers was effectively abolished. Photoexcitation of 47 produced a single, strongly Stokes shifted emission band, which moved to higher energy upon saturation with Zn2+. By changing the denticity of the coordination site, the binding affinity of 47 was readily tuned without significantly altering the photophysical properties. While the Zn(II)-responsive indicators 46 and 47 were not evaluated in a biological setting, the structurally related probe 48 (Zinbo-5) proved to be suitable for detecting changes of intracellular Zn(II) pools by emission ratiometric TPEM (Figure 15).

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The centrosymmetric benzazole derivative 49 exhibited a 2PA cross section of 530 GM (λ = 740 nm) in DMF which slightly decreased to 470 GM (λ = 740 nm) upon saturation with Zn(II). In the absence of metal ions, the indicator showed a low-energy emission band of the phototautomer; however, presumably due to the presence of ground state rotamers, an additional band at higher energy appeared. Coordination of Zn(II) yielded a uniform emission band at higher energy relative to the tautomer fluorescence. Under basic conditions, a very large cross section of 4120 GM was found for the bisphenolate dianionic species. The bis(2-picolyl)amine-modified quinoline derivative 50 is presumably also engaged in an excited state proton transfer process, in which the quinoline nitrogen is protonated. Contrary to the benzazole fluorophores discussed above, the photoproduct is non-fluorescent and thus the emission of 50 is effectively quenched. Upon saturation with Zn(II), a 14-fold emission enhancement was observed. The indicator was tested in A431 cells by TPEM and showed a strong emission response upon incubation with exogenous Zn(II).

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3. Fluorescent Labels and Indicators Commonly Used in Biological Research Despite the many well-established and proven design strategies, the 2PA action cross sections achieved in polar solvents, and more specifically, in aqueous buffer solution at high ionic strength, are modest and typically do not exceed 200 GM as apparent from the preceding sections. Although most of the fluorescent indicators and labels that are



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commonly used in biological research offer only small 2PA cross sections, their sensitivity may be still sufficient for routine TPEM imaging applications. Given that most of these dyes are readily available, either as bioconjugatable labels or already attached to antibodies, peptides, lipids, or drugs, their application in TPEM remains an attractive alternative. For this reason, we conclude this review with a brief overview of the 2PA cross sections and photophysical properties of commonly used biological labels and probes that were not specifically developed for TPEM (Table 6).

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With a cross section of 180 GM, rhodamine B ranks among the brightest of the traditional fluorescent labels. Because fura-2 does not exhibit significant changes in the emission spectrum upon Ca(II)-binding, this indicator is not suitable for ratiometric TPEM imaging; nevertheless, after careful calibration the dye has been successfully applied to dynamically image intracellular Ca(II) by TPEM within the mammalian cerebral cortex, an epithelial cell line, and in ventricular cardiomyocytes. In contrast, indo-1 undergoes a Ca(II)-induced shift of the peak emission, rendering this dye well suited for ratiometric TPEM. For example, indo-1 was used to visualize voltage induced intracellular Ca(II) waves in fish keratocytes and Ca(II) transients in the course of the mouse sperm-egg fusion.

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Mostly based on established fluorophore platforms, numerous cation sensors for the detection of other biologically important metal ions have been developed. Although their photophysical properties were not optimized for two-photon excitation, many of the probes have been successfully employed in TPEM. For example, intracellular zinc stores were visualized in cell culture and in mossy fiber synapses of live hippocampal slices by TPEM with fluorescein-based probes., Zinquin, one of the early zinc-selective fluorescent probes was utilized for imaging zinc-rich intracellular compartments in primary cultured hippocampal neurons. A number of biomolecules such as NAD(P)H or flavoproteins are intrinsically fluorescent and can be directly visualized by TPEM., While their cross section is significantly smaller compared to exogenous fluorescent labels (Table 6), TPEM of biomolecules offers the opportunity to non-invasively study biological processes under physiological conditions. Taking advantage of its fluorescent properties, the in vivo distribution of NAD(P)H has been visualized in human skin cells as well as in mitochondria of skeletal muscles., Finally, green fluorescent protein (GFP) and its variants exhibit also substantial 2PA cross sections and offer particularly exciting possibilities to label and track proteins in live cells.,

4. Conclusions Author Manuscript

Over the past decade, TPEM has rapidly emerged as a valuable technique in the toolbox of the cell biologist. By exploiting a diverse array of rational design strategies, a substantial number of fluorescent probes and labels with optimized 2PA properties have been developed. Compared to traditional probes and labels, the 2PA cross sections have been improved by approximately one order of magnitude with the benefit of enhancing their optical sensitivity and thus allowing excitation at lower laser power. While the development of organic fluorophores with further improved 2PA cross section remains an important goal, the boundaries imposed by the spectral window of the Ti-sapphire laser used as excitation



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source in TPEM combined with the polar aqueous environment encountered in biological studies appear to set a limit to the maximum achievable 2PA action cross section and optical sensitivity. For example, while organic fluorophores with centrosymmetric architecture offer high 2PA cross sections in organic solvent, their highly polarized excited states give rise to increased non-radiative deactivation in an aqueous environment and thus substantially diminished quantum yields. Furthermore, the lowest energy two-photon allowed state in centrosymmetric fluorophores is S2, whereas according to Kasha’s rule emission occurs from S1 at lower energy, which might be insufficient to drive a PET process necessary for cation-induced fluorescence switching. Finally, the integration of a single cation-binding site into a centrosymmetric architecture poses additional challenges. Although the latter problem can be addressed with architectures containing two cation-binding sites, an unbalanced occupancy inevitably results in symmetry breaking, which in turn jeopardizes the 2PA cross section. The presence of multiple coordination species with different photophysical properties renders the quantitative interpretation of the emission response particularly challenging. For these reasons, non-centrosymmetric fluorophores appear to be better suited for the design of robust cation-responsive probes; however, their cross sections in the 700– 950 nm range rarely exceed 100 GM. Regardless of their molecular symmetry, the majority of fluorophores with optimized 2PA are based on extended linear π-systems, thus imposing a high degree of lipophilicity that must be counterbalanced with charged or polar hydrophilic substituents. At present, membrane permeant TPEM probes tend to partition within lipid bilayers of intracellular compartments and organelles and offer little control over their subcellular distribution. The accumulation in specific compartment deserves particular attention, since the distribution of endogenous metal pools could be directly influenced by a probe acting as an ionophore. Furthermore, the lower polarity environment of cellular membranes may affect the fluorescence response of the probe in a metal-independent manner and thus yield undesired artifacts. These challenges could be in part addressed by the recently developed bio-orthogonal labeling approaches such as the SNAP tag– or HaloTag, where the probe or label is covalently tethered to a well-defined protein pocket that would protect from environment-dependent influences. While the majority of work has focused on optimizing the 2PA cross section of organic materials, semiconductor quantum dots and coinage metal nanoclusters have been reported to be robust emitters with extraordinary large 2PA cross sections,– thus potentially leading the way towards alternative strategies for the design of ultrabright and highly sensitive cation-responsive probes for biological TPEM imaging.

Acknowledgments Author Manuscript

Financial support from the National Institutes of Health (R01DK68096) is gratefully acknowledged.

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Author Manuscript Chem Mater. Author manuscript; available in PMC 2017 May 12.


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Figure 1.

Selection of molecular architectures for the design of fluorophores with large two-photon absorption cross sections.



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Author Manuscript Author Manuscript Figure 2.

Fluorescent labels with dipolar architecture developed for biological two-photon imaging. Selected photophysical properties of each dye are compiled in Table 1.



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Author Manuscript Figure 3.

Author Manuscript

Two-photon fluorescence micrograph of HCT 116 cells incubated with probe 2a (20 μM, 1 h 50 min). (A) DIC and (B) 3D reconstruction from overlaid TPEM images obtained from a modified laser scanning confocal microscopy system equipped with a broadband, tunable Ti:sapphire laser (220 fs pulse width, 76 MHz repetition rate), pumped by a 10 W frequency doubled Nd:YAG laser. (60X objective, NA = 1.35). Scale: 5 μm grid. Reprinted with permission from ref. Copyright American Chemical Society 2010.



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Figure 4.

Fluorescent labels with quadrupolar architecture developed for biological two-photon imaging. Selected photophysical properties of each dye are compiled in Table 2.



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Figure 5.

Two-photon images of HeLa cells stained with 11a (left, 800 nm, 1 mW), and 11b (right, 900 nm, 15 mW). Reprinted with permission from ref. Copyright American Chemical Society 2009.



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Metal complexes with octupolar fluorophore architecture with strongly enhanced 2PA cross sections.



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Author Manuscript

Two-photon excited luminescence (left, excitation at 760 nm) and phase contrast (right) images of T24 cancer cells fixed in ethanol and loaded with [Na]3[Eu(19)3]. Images were taken on a Zeiss LSM510 NLO META confocal microscope equipped with a femtosecond Ti:sapphire laser. Reprinted with permission from ref. Copyright American Chemical Society 2008.



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Author Manuscript

Metal-responsive fluorescent two-photon absorbing indicators with quadrupolar architecture. Selected photophysical properties of each dye are compiled in Table 3.



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Author Manuscript

Fluorescence switching with a pair of centrosymemtric fluorophores. The free probe 28 is quenched through resonance energy transfer. Coordiantion of K(I) allosterically renders the conformation of the probe more favorable for Pb(II) binding, which inhibits fluorescence quenching through an additional conformational change.



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Figure 10.

Author Manuscript

Images of a fresh mouse hippocampal slice stained with 10 μM 35 (AM ester, CMg1-AM). (a) A bright-field image (a) and TPEM image (b) show the dentate gyrus and the CA1 region at a depth of 250 μm by magnification at 10×. (c) Magnification at 40× shows the CA1 layer at a depth of 100 μm. (d) Magnification at 100× shows CA1 pyramidal neurons at a depth of 100 μm. Scale bars: 300 (a, b), 120 (c), and 30 (d) μm, respectively. The TPEM images were collected at 560–640 nm upon excitation by 880 nm laser photons. Reprinted with permission from ref. Copyright American Chemical Society 2007.



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Figure 11.

Photoinduced electron transfer (PET) switching. a) In absence of the metal cation Mn+, electron transfer from the donor D to the excited fluorophore (F*) is thermodynamically favorable. The rate constant for electron transfer ket is faster than kr for radiative deactivation, resulting in emission quenching. b) Metal coordination to the electron donor D decreases the driving force for PET, and slows down the electron transfer process. Radiative deactivation favorably competes with PET, and the fluorescence is switched on (knr = nonradiative deactivation rate constant, kcr = charge recombination rate constant).



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Figure 12.

Chemical structures of cation-responsive indicators utilizing a dipolar naphthalene moiety as two-photon absorbing fluorophore. The fluorescence output is modulated in an analytedependent manner through a photoinduced electron transfer (PET) switching mechanism.



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Author Manuscript

Simplified Jablonski diagram illustrating metal ion induced inhibition of excited state intramolecular proton transfer (ESIPT). a) Light absorption leads to formation of a locally excited state N*, which undergoes ultrafast intramolecular proton transfer (ESIPT) to form the excited tautomer T*. After radiative deactivation, the tautomer thermally equilibrates back to the initial ground state N. b) Metal coordination inhibits ESIPT due to removal of the intramolecular hydrogen bond. The fluorescence emission is strongly blue-shifted compared to the metal free indicator. (kr = radiative rate constant, knr = non-radiate rate constant, kESIPT = rate constant for excited state intramolecular proton transfer).



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Figure 14.

Chemical structures of cation-responsive indicators utilizing an excited state intramolecular proton transfer (ESIPT) process to alter the fluorescence output in a metal-ion dependent fashion.



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Author Manuscript Author Manuscript Author Manuscript Figure 15.

Author Manuscript

TPEM emission ratio images of fibroblast [L(TK)−] cells incubated with 48 (Zinbo-5). (A) Brightfield transmission image; (B) TPEM ratio of images collected at 445 and 402 nm; (C) TPEM ratio image following a 30 min treatment with 10 μM zinc sulfate and 20 μM pyrithione at pH 7.4, 25 °C, followed by wash with 48 stock; (D) TPEM ratio image of the same field after a 15 min treatment with 1 mM TPEN. Reprinted with permission from ref. Copyright American Chemical Society 2004.


Author Manuscript

Author Manuscript

Author Manuscript 120 19 213 518 1020 67 24 n.d.

202

25

248

563

1146

350

470

92

1a

1b

2a

2b

3a

4a

4b

6

dichloromethane as solvent.

b

Fluorescence quantum yield.

a

Action Cross Section (ηδ) [GM]

2PA Cross Section (δ) [GM]

Fluorophore

457 350b

0.49b

453

411

398

403

363

390

abs λmax [nm]

0.05

0.19

0.89

0.92

0.86

0.74

0.60

ΦFa

720

940

880

830

730

730

740

780

2PA λmax [nm]

538

590

570

525

444

452

475

492

em λmax [nm]

DMSO

water

water

CH2Cl2

hexane

hexane

DMSO

CH2Cl2

Solvent

Reference

Photophysical properties of fluorescent labels with dipolar architecture developed for biological two-photon imaging (structures depicted in Figure 2).

Author Manuscript

Table 1 Sumalekshmy and Fahrni Page 41


Author Manuscript

Author Manuscript

Author Manuscript 115 43 57 125 328 1035 50–500 294

160

110

100

314

335

1090

100–1000

700

10a

10b

11a

11b

12a

12b

13a

14


a

Action Cross Section (ηδ) [GM]

2PA Cross Section (δ) [GM]

Fluorophore

0.42

0.50

0.95

0.98

0.40

0.57

0.39

0.72

ΦF a

410

432

397

405

502

387

357

383

abs λmax [nm]

700

690–800

730

730

800

740

720

720

2PA λmax [nm]

505

509

433

446

512

479

450

453

em λmax [nm]

water

water

hexane

hexane

dichloromethane

dichloromethane

water

water

Solvent

,

,

Reference

Photophysical properties of fluorescent labels with centrosymmetric architecture developed for biological two-photon imaging (structures depicted in Figure 4).

Author Manuscript



Author Manuscript

Author Manuscript


430 9 570 n/a 62 51 180 9 56 n.d. 14 4 36 110 n.d. n.d. n.d. 100

2150

45

1120

300

517

638

1800

300

120

20

30

n.d.

133

917

12

11

n.d.

998

20

20+Mg(II)

21

21+Ag(I)

22

22+Pb(II)

23

23+Mg(II)

24

24+Ca(II)

25

25+Zn(II)

26a

26b

27

27+Ca(II)

28

28+Pb(II)+K(I)


a

Action Cross Section (ηδ).[GM]

2PA Cross Section (δ).[GM]

Fluorophore

0.1

0.017

n.d.

n.d.

0.12

0.35

n.d.

0.47

n.d.

0.47

0.03

0.10

0.08

0.12

n.d.

0.50

0.19

0.20

ΦF a

385

460

335

362

434

370

425

425

425

425

445

468

362

362

447

467

378

472

abs λmax [nm]

780

780

700

700

800

800

780

780

820

760

810

810

720

720

810

810

810

810

2PA λmax [nm]

Author Manuscript

Fluorescent metal-ion indicators with centrosymmetric architecture

500

520

512

510

564

440

n.d.

610

550

550

665

624

590

460

n/a

590

576

610

em λmax [nm]

acetonitrile

acetonitrile

HEPES pH 7.0

HEPES pH 7.0

DMF

DMF

acetonitrile

acetonitrile

acetonitrile

acetonitrile

acetonitrile

acetonitrile

HEPES pH 7.2

HEPES pH 7.2

acetonitrile

acetonitrile

acetonitrile

acetonitrile

Solvent

,

,

Reference

Author Manuscript


Author Manuscript

Author Manuscript


112 122 161 108 47 168 11 55 42 12 19.5 2.5 4 14 1.8 14 84 107

350

240

350

130

65

840

31

77

60

15

65

5

40

20

35

20

290

382

29

29-Zn(II)

29-Hg(II)

30

30-Zn(II)

31

32

32-Zn(II)

33a (pH 3)

33a (pH 8)

33b (pH 2)

33b (pH 12)

34a (pH 2)

34a (pH 12)

34b (pH 2)

34b (pH 12)

35

35-Mg(II)


a


Two-photon Cross Section (δ).[GM]

Fluorophore

0.28

0.29

0.7

0.05

0.7

0.1

0.5

0.3

0.8

0.7

0.71

0.35

0.20

0.73

0.83

0.46

0.51

0.32

ΦF a

443

413

330

382

328

381

332

390

326

355

362

338

400

381

391

382

385

400

abs λmax [nm]

880

820

710

780

710

780

710

800

710

710

730

690

790

780

780

820

820

820

2PA λmax [nm]

Author Manuscript

Fluorescent metal-ion indicators with dipolar architecture

559

556

450

572

450

562

472

569

465

530

497

441

613

462

496

540

542

609

em λmax [nm]

water

water

aq. buffer

aq. buffer

aq. buffer

aq. buffer

aq. buffer

aq. buffer

aq. buffer

aq. buffer

MeOH

MeOH

water

THF

THF

ethanol

ethanol

ethanol

Solvent

Reference

Author Manuscript


Author Manuscript

Author Manuscript 92

127

38

0.65 0.15 0.043 0.16

95 125 86 95 110 90 100

146

215

210

140

40-Na(I)

41-Mg(II)

42a-Zn(II)

42b-Zn(II)

43-Hg(II)

44a-Ca(II)

44b-Ca(II)

0.47

0.58

0.65

110

224

0.49

0.72

0.64

0.60

ΦF a

39-Ca(II)


a

88

138

37b-H+

86

143

37a-H+

Action Cross Section (ηδ). [GM]


Fluorophore

8

12

6

54

21

15

8

40

n/a

64

22

Fluorescence enhancement factor

357

372

361

365

365

365

365

369

364

365

364

abs λmax [nm]

Author Manuscript

Fluorescent metal-ion indicators with PET switching mechanism

780

780

780

780

780

780

780

780

780

780

780

2PA λmax [nm]

501

500

498

499

498

498

500

500

496

496

498

em λmax [nm]

pH 7.0

pH 7.0

pH 7.0

pH 7.2

pH 7.2

pH 7.1

pH 7.1

pH 7.2

pH 3

pH 3

pH 3

Solvent

Author Manuscript

Table 5

Reference

Sumalekshmy and Fahrni Page 45


Author Manuscript

Author Manuscript 180 35

Rhodamine B

Coumarin 485

Chem Mater. Author manuscript; available in PMC 2017 May 12. 125 250 150 55 10

Lysotracker

SBFI Na

Sodium Green with Na(I)

FluoZin with Zn(II)

TSQ with Zn(II)

Endogenous Fluorophores:

56

Mag-fura2 with Mg(II)

4

24

30

20

10

17

30

with Ca(II)

4.5 2

12

Calcium Green

Indo-1

1.5

3.5

Indo-1

with Ca(II)

36

12

11

17


C18-fura-2 with Ca(II)

with Ca(II)

Fura-2

2.1

55

Rhodamine 6G

Fluorescent Indicators:

2.6

0.6

37


Lucifer Yellow

Nile Blue A

BODIPY

Fluorescein, pH 13

Fluorescent Labels:

Fluorophore

850 750

543b 403b

362

494

507

334

575

530

508

508

331

349

335

335

780

780

800

780

780

780

820

820

700

700

700

780

700

700

750

530b

362

850

800

649a 430

920

780

507

491

abs λmax [nm]

2PA λmax [nm]

Author Manuscript

Two-photon cross sections of selected fluorophores commonly used in biological research.

495

516

530

524

593

491

534

534

398

482

505

510

518

501b

568b

558b

530

660a

520

514

em [nm] λmax Reference

Author Manuscript


0.02 0.1–0.8 41 11

Flavins EGFP DsRed

in methanol.

b

in octanol.

a

Author Manuscript NADH


Author Manuscript


558

489

375, 445

340

abs λmax [nm]

960

920

700–730

690–730

2PA λmax [nm]

583

508

526

450

em [nm] λmax

Author Manuscript

Fluorophore

Reference

Sumalekshmy and Fahrni Page 47

Author Manuscript


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Two-photon fluorescent probes for metal ions in live tissues.

Fluorescent Probes for Biological Imaging.

Bright fluorescent silica-nanoparticle probes for high-resolution STED and confocal microscopy.

Recognition- and reactivity-based fluorescent probes for studying transition metal signaling in living systems.

Fluorescent probes for biomedical applications (2009-2014).

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