Metadata from data: identifying holidays from anesthesia data.

The increasingly large databases available to researchers necessitate high-quality metadata that is not always available. We describe a method for gen...
443KB Sizes 0 Downloads 10 Views

Recommend Documents


Identifying transposon insertions and their effects from RNA-sequencing data.
Insertional mutagenesis using engineered transposons is a potent forward genetic screening technique used to identify cancer genes in mouse model systems. In the analysis of these screens, transposon insertion sites are typically identified by target

Identifying the topology of signaling networks from partial RNAi data.
Methods for inferring signaling networks using single gene knockdown RNAi experiments and reference networks have been proposed in recent years. These methods assume that RNAi information is available for all the genes in the signal transduction path

A metadata-driven approach to data repository design.
The design and use of a metadata-driven data repository for research data management is described. Metadata is collected automatically during the submission process whenever possible and is registered with DataCite in accordance with their current me

OMICS studies: How about metadata checklist and data publications?
Data fully utilized by the community resources promote progress rather than repetition. Effective data sharing can accelerate the transition from data to actionable knowledge, yet barriers to data sharing remain, both technological and procedural. Th

The eGenVar data management system--cataloguing and sharing sensitive data and metadata for the life sciences.
Systematic data management and controlled data sharing aim at increasing reproducibility, reducing redundancy in work, and providing a way to efficiently locate complementing or contradicting information. One method of achieving this is collecting da

Metadata based management and sharing of distributed biomedical data.
Biomedical research data sharing is becoming increasingly important for researchers to reuse experiments, pool expertise and validate approaches. However, there are many hurdles for data sharing, including the unwillingness to share, lack of flexible

Integration of extracellular RNA profiling data using metadata, biomedical ontologies and Linked Data technologies.
The large diversity and volume of extracellular RNA (exRNA) data that will form the basis of the exRNA Atlas generated by the Extracellular RNA Communication Consortium pose a substantial data integration challenge. We here present the strategy that

Compact graphical representation of phylogenetic data and metadata with GraPhlAn.
The increased availability of genomic and metagenomic data poses challenges at multiple analysis levels, including visualization of very large-scale microbial and microbial community data paired with rich metadata. We developed GraPhlAn (Graphical Ph

Identifying ELIXIR Core Data Resources.
The core mission of ELIXIR is to build a stable and sustainable infrastructure for biological information across Europe. At the heart of this are the data resources, tools and services that ELIXIR offers to the life-sciences community, providing stab