Influence of Anodes Surface Chemistry on Microbial Fuel Cells Operation Carlo Santoro, Sofia Babanova, Kateryna Artyushkova, Jose A. Cornejo, Linnea Ista, Orianna Bretschger, Enrico Marsili, Plamen Atanassov, Andrew J. Schuler PII: DOI: Reference:

S1567-5394(15)00060-2 doi: 10.1016/j.bioelechem.2015.05.002 BIOJEC 6842

To appear in:

Bioelectrochemistry

Received date: Revised date: Accepted date:

8 November 2014 23 April 2015 3 May 2015

Please cite this article as: Carlo Santoro, Sofia Babanova, Kateryna Artyushkova, Jose A. Cornejo, Linnea Ista, Orianna Bretschger, Enrico Marsili, Plamen Atanassov, Andrew J. Schuler, Influence of Anodes Surface Chemistry on Microbial Fuel Cells Operation, Bioelectrochemistry (2015), doi: 10.1016/j.bioelechem.2015.05.002

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ACCEPTED MANUSCRIPT Influence of Anodes Surface Chemistry on Microbial Fuel Cells Operation Carlo Santoroa,b,1, Sofia Babanovaa,1, Kateryna Artyushkovaa, Jose A. Cornejoa, Linnea Istac, Orianna Bretschgerd, Enrico Marsilie, Plamen Atanassova *, Andrew J. Schulerb

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the two authors have contributed equally to the manuscript

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Center for Micro-Engineered Materials (CMEM), Department of Chemical & Biological Engineering, University of New Mexico, Albuquerque, NM 87131, USA b Center Emerging Energy Technologies (CEET), Department of Civil Engineering, University of New Mexico, Albuquerque, NM 87131, USA c Center for Biochemical Engineering, Department of Chemical & Biological Engineering, University of New Mexico, Albuquerque, NM 87131, USA d J. Craig Venter Institute, 4120 Capricorn Lane, La Jolla, CA 92037, United States e Singapore Centre on Environmental Life Sciences Engineering (SCELSE), Nanyang Technological University, 60 Nanyang Drive, 637551 Singapore, Singapore

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Corresponding authors: * Prof. Plamen Atanassov. Center for Micro-Engineered Materials (CMEM), Department of Chemical & Biological Engineering, MSC01 1120, Farris Engineering Center 247, 1 University of New Mexico, Albuquerque 87101-0001, United States. Tel.: +1 505 277 6112. E-mail address: [email protected] (P. Atanassov).

Self-assembled monolayers (SAMs) modified gold anodes are used in single chamber microbial fuel cells for organics removal and electricity generation. Hydrophilic (-N(CH3)3+, -OH, -COOH) and hydrophobic (-CH3) SAMs are examined for their effect on bacterial attachment, current and power output. The different substratum chemistry affects the community composition of the electrochemically active biofilm formed and thus the current and power output. Of the four SAM-modified anode tested, -N(CH3)3+ results in shortest start up time (15 days), highest current achieved (225 μA cm-2) and highest MFC power density (40 μW cm-2), followed by –COOH (150 μA cm-2 and 37 μW cm-2) and –OH (83 μA cm-2 and 27 μW cm-2) SAMs. Hydrophobic SAM decreases electrochemically active bacteria attachment and anodes performance in comparison to hydrophilic SAMs (-CH3 modified anodes 7 μA cm-2 anodic current and 1.2 μW cm-2 MFC’s power density). A consortium of Clostridia and δ-Proteobacteria is found on all the anode surfaces, suggesting a synergistic cooperation under anodic conditions. Keywords: microbial fuel cells, self bioelectrocatalysis, anode biofilm analysis

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ACCEPTED MANUSCRIPT Introduction

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Numerous bacterial species have shown the ability to oxidize organic compounds and use insoluble metal oxides and electrodes as their terminal electron acceptor [1-2]. Extracellular electron transfer in bacteria enable the construction and operation of bioelectrochemical systems called microbial fuel cells (MFCs) [3].

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Electron transfer rate at the biofilm/electrode interface is one of the key factors determining the MFC’s current and power output. Therefore, it is critical to optimize the electrode morphology and chemistry to promote fast electron transfer rate. This goal can be achieved through selection of specific electrode materials, enrichment with anode-respiring bacteria, morphological or chemical modifications of the electrode surface [4-5]. The electrode material and morphology should facilitate bacterial attachment and subsequent biofilm formation. At the same time, anode surface chemistry along with the biofilm formation should enhance electron transfer from bacteria to the electrode [6-7]. Several thermal or chemical treatments have been described to reduce MFC start-up time by facilitating rapid cell attachment and biofilm development for enhanced power output in MFC [3, 8-9]. Thermal treatment of the electrodes leads to modification of the surface roughness and porosity and thus enhances cells concentration and biofilm development [10-13]. Depending on the gas atmosphere (e.g., nitrogen, oxygen, ammonia, etc.) used in thermal treatment, hydrophilic functional groups can be added on the electrode surface [14]. The main purpose of the chemical treatment is to introduce functional groups (typically nitrogen and oxygen containing groups) that improve cell attachment and biofilm development on electrode surface [15-18]. Several compounds, such as nitric acid [1516], ethylenediamine [15], ammonium nitrate [16], ammonium persulfate [16], polyaniline [17], 4(N,N-dimethylamino) benzene diazonium [18] have been used for surface chemical modification of carbonaceous electrodes. However, as previously shown [19], the chemical treatment of carbonaceous surfaces (e.g., carbon cloth) affect both the chemistry and morphology (e.g., roughness and porosity) of said surfaces, thus a clear discrimination of the benefits provided by chemical and surface effects is not straightforward [19]. The inability to distinguish the influence of only one parameter from the whole set of parameters that are usually altered through the commonly used surface modification techniques is a result of the intercorrelation between the introduced variances in the parameters’ magnitudes [20]. Therefore, the impact of the anode surface chemistry on current and power output in MFC should be studied using flat electrode material, thus de-coupling chemical effects from change in surface morphology. In addition, proper statistical interpretation of the data sets should be provided. This statistical tool should have the ability to identify correlation between particular factors and the final output of the studied system. Such a statistical technique is Principal Component Analysis (PCA), which application in MFCs and material analysis has been successfully demonstrated [20-22]. Recently, Guo et al. [7] studied the influence of the surface charge and hydrophobicity on the biomass accumulation, taxonomic distribution and electrochemical activity of multiple surfacemodified anodes operated in half-cell bioelectrochemical systems. Anodes consisted of modified glassy carbon electrodes through electrochemical grafting with aryl dyazonium salts. As a result, the surface of each anode has been altered distinctively to be hydrophilic (-OH, -SO3-, N(CH3)3+) or hydrophobic (-CH3) with positive, negative or neutral charge [7]. The researchers found that the most positively charged and hydrophilic surfaces were associated with improved biofilm formation and selection of electroactive microbes such as Geobacter spp. [7]. A similar

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ACCEPTED MANUSCRIPT conclusion has been reported by Picot et al., who observed significant increases in anode current output when the surface was amended with positively charged phenylphosphanium cations [23].

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While these studies have added new knowledge relative to how anode surface modifications impact biofilm development and electrochemical activity under poised-potential conditions, the specific effects that functional groups may have on MFC operation, startup time, current and power output have not been described. Further, previous reports used modified carbon substrates including glassy carbon [7] and graphite plates [23]; however, these modifiable carbon substrates still have porous structures and therefore differential surface areas [24]. To separate the effects of surface area and surface chemistries, in this study we used gold anodes with ω-substituted alkanethiolates on gold terminated with functional groups (-N(CH3)3+, -COO-, -OH and -CH3). We have previously shown that self-assembled monolayers (SAMs) improve cell attachment and early biofilm formation [25-26]. Here, we extend beyond poised-potential studies and use MFCs operated with a fixed resistance and equipped with activated carbon air cathodes to demonstrate how surface modified anodes can work specifically to enrich an electrocatalytic biofilm under less controlled operational conditions. The correlation between the surface chemistry of the anode and the MFC current and power output is investigated. Each anode material was tested in a separate MFC in order to: i) avoid undesired shunt-current losses, alternative current path through the ionically conductive electrolyte that can interfere with the current/power output, ii) avoid electrochemical and microbiological interaction among the different electrodes exposed to the same electrolyte, iii) study the air-breathing cathode performances related with different anode used and show the overall output, iv) evaluate the microbial community developed on the electrodes (anode and cathode) starting from the same initial solution (in separate reactors), v) use activated sludge (no pretreatment or previous enrichment) as inoculum to capture how biofilms establish on SAMs-modified electrodes under different selective pressures than have been reported previously (e.g. single chamber MFCs with air-breathing cathodes). Following electrochemical characterization for 45 days, DNA from anodic biofilms was sequenced to characterize the electrogenic communities and identify any phylogenetic differences that might have occurred as a function of the unique anode surface modifications.

2. Materials and Method

2.1 Self Assembled-Monolayer production

Microscope glass coverslips (24 × 60 mm, #1, VWR, USA) were cleaned under UV ozone. The vacuum chamber was evacuated to~10-6 millitorr and a 15 Å Cr layer was deposited followed by 300 Å gold. Immediately after gold deposition, samples were incubated in 1 mM ethanolic solutions of 1-mercaptoundecanol (OH; Aldrich, St. Louis MO), undecanethiol (CH3; Aldrich, St. Louis, MO),1-mercaptoundecanoic acid (COOH, Aldrich, St Louis, MO) 1-mercaptoundecyl trimethylamine (N(CH3) 3+; Prochimia, Poland) [27].

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2.2 MFC Configuration and cathode material

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After an immersion to the specific solution of at least 24 hours, the regularity of the SAMs surface chemistry were checked using X-ray Photoelectron Spectroscopy (XPS) as shown previously [27]. Contact angle was measured in order to quantify the wettability of the different solid SAMs. The contact angles were determined utilizing ultrapure water at room temperature and ambient humidity using the sessi e drop technique with a goniometer ( ame -Hart Instrument Co., Model No. 400-22-300 with DROPimage Standard, NJ). Ultrapure water droplets (1.5 μL) were deposed on each substrate, recorded in a video and then analyzed to obtain the contact angles. Each measurement was repeated at least 8 times at different locations on each SAM surface. [28].

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Single chamber microbial fuel cells (MFC) with a volume of 130 mL were assembled as previously described [29]. The anolyte was 50% 0.1 M phosphate buffer solution (PBS) with 0.1 M KCl and 50% of activated sludge from the Albuquerque Wastewater Treatment Plant. Sodium acetate (C2H3NaO2, 5 g L-1) was used as a substrate and introduced periodically in each MFC to maintain non-limiting substrate concentration. The pH of the anolyte was 7.4-7.5 and remained constant along the entire experiment [30]. SAM-modified gold anodes (geometric area 14.4 cm2) were assembled with two coverslips using a titanium wire with the functionalized surface facing the medium solution. The anode was connected to the cathode through an external resistance of 1000 Ω. The cathode used in this work has been previous y described [22]. Briefly, activated carbon (Calgon, USA) with a surface area of 802 m2 g-1 was grinded with 20%wt PTFE (60% dispersion in water, Sigma Aldrich). 60 ± 2 mg cm-2 of the obtained mixture were pressed at 1400 psi for 2 minutes on a carbon cloth (30% wt wet proof, Fuel Cell Earth) used as the electron collector. The cathode assembly was then heated at 200 ºC for 1 h before utilization. The cathode had a geometric surface area of 3.5 cm2 directly exposed to the electrolyte [22]. The SMFCs were operated in duplicate for each SAM-modified anode material at room temperature (21±1ºC). 2.3 Electrochemical measurements The overall single chamber microbial fuel cell (MFC) potential was recorded every 25 min using a datalog system (Personal DAQ/56, USA) connected to a PC for over 45 days. At the end of the experiment, anode and cathode potentiodynamic polarization curves were taken using a threeelectrode configuration as previously described using a VersaStat potentiostat (Princeton Applied Research, USA) [31]. Briefly, the electrode under investigation (anode or cathode) was used as the working electrode, Ag/AgCl 3M KCl (+0.21 V vs. SHE) was used as the reference electrode and a stainless steel A316 mesh with the same area of the working electrode was used as a counter electrode. The anode potential was scanned from open circuit potential (OCP) to 0 V vs Ag/AgCl 3M KCl. The cathode potential was scanned from OCP to -0.3 V vs Ag/AgCl 3M KCl. The scan rate utilized for the potentiodynamic curve was 0.2 and -0.2 mV s-1, respectively [31]. The cell polarization curves were carried out after the single electrode polarizations in two

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electrode mode, connecting the anode as working and the cathode as counter and reference electrode. The polarization was started after the OCP stabilized (approximately one hour), and then the polarization curve was measured from the open circuit cell potential (OCP) to 0.01 V. The power (P) was obtained using the equation P = U × I where U and I are the MFC voltage and current, respectively. Power and current are normalized to the anode geometric surface area (14.4 cm2).

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2.5 Biofilm characterization on the electrode

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At the end of the 45 days experiments, anodic and cathodic biofilm were removed by scraping the electrodes. Pyrosequencing was done on one anode per each electrode material and on the planktonic biomass of the MFC equipped with N(CH3)3+–modified anode. DNA was extracted using sucrose lysis/cetyltrimethylammonium bromide (CTAB) as previously described [32], and its purity was evaluated from the ratio of absorbances at 260 and 280 nm. Samples were shipped on ice for DNA pyrosequencing by Research and Testing Laboratories (Lubbock, TX, USA). Bacterial tag-encoded FLX amplicon pyrosequencing was performed as described previously [33] with small modifications to utilize the Titanium sequencing platform (Roche Applied Science, Indianapolis, IN). A single 35 cycle PCR step with Qiagen HotStar master mix and addition of 0.5 U of HotStar HiFidelity polymerase were used in each reaction (Qiagen, Valencia, CA). The primers were 28f (5’-GAG TTT GAT CNT GGC TCA G-3’) and 519r (5’-GTN TTA CNG CGG CKG CTG-3’) (Escherichia coli 16S gene numbering). Pyrosequence reads were analyzed at UNM using AmpliconNoise 1.25 [34] to remove low quality sequences, which included sequences less than 200 bp in length, with an average quality score of less than 25, containing ambiguous characters, and/or without the correct primer sequence. A workflow script in QIIME 1.80 was used to pick operational taxonomic units (OTUs) at the 97% sequence identity level. Representative sequences from each OTU were identified by the Ribosomal Database Project44 classification method using QIIME, with assignment of taxonomic identities using the Greengenes 16s rRNA gene database [35]. 3. Results and Discussion

Gold electrodes were modified with self assembled monolayers (SAMs) having four different terminal groups, –CH3, -OH, -COOH and –N(CH3)3+. A stable molecular monolayer coated uniformly the surface as showed previously [27-28]. As the aim of this study was to compare the influence of the surface chemistry on biofilm formation, current and power generation in MFC rather than compare modified vs. unmodified anodes, no control experiment with bare gold electrode was carried out. 3.1 Overall MFC Voltage PLEASE INSERT HERE FIGURE 1

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The MFC potential under constant external load (1000 Ω) was monitored for 45 days (Figure 1). As in many other MFC studies, the potential increased with time, indicating electrochemically active biofilm formation. However, the potential evolution with time was different for each material, indicating differences in electroactivity and electron transfer rate [36].

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MFCs fitted with –N(CH3)3+–SAM anodes showed a rapid potential increase (after 15 d), followed by –COOH (17 d), -CH3 (17 d) and –OH (20 d) (Figure 1). The -N(CH3)3+-MFCs showed the fastest potential slope (170-195 mV d-1) and achieved stable conditions after roughly 18 days. COOH-MFCs showed a slower potential slope (75-96 mV d-1) and stabilized after 2223 days. The potential slope of OH-MFCs could be divided in two different parts: i) at potential < 0.15 V, the slope was of 21-25 mV day-1; ii) at potential 0.42 > U > 0.15 V with the slope increased to 50-56 mV day-1. Finally, the U slope of CH3-MFCs was much smaller than the other materials, only 2.2-2.3 mV day-1. These results show that anode coating affects both the start-up time of potential production and the rate of potential increase with time, which in turn correlates to the attachment and growth of electrochemically active biofilms. The relative start-up times recorded for the different functional groups mostly correlated to results reported by Guo et al. using chemically modified glassy carbon anodes (e.g. –N(CH3)3+ > -CH3 > -OH); however, our systems demonstrated overall faster start up times for each comparative functional group. For example, Guo et al. reported a startup time of 23 days for their -N(CH3)3+-modified electrodes poised at -0.2V (vs. Ag/AgCl) [7]. The reported startup time is eight days slower than that observed in this study with -N(CH3)3+-modified gold electrodes operated under MFC mode in a single-chamber system. Similarly, the –OH and –CH3 modified electrodes in the Guo et al. study showed start up times of 25.4 days and 37.2 days, respectively [7]. Our results indicate significantly faster start-up times (5-20 days faster). Despite the different start-up times for each of our well performing functional groups, the N(CH3)3+-, COOH- and OH-MFCs reached a similar stable voltage output (0.41-0.43 V) since the external resistance chosen was higher than the smaller sustainable resistance [37]. However, the potential of CH3-MFC increased slowly over time and stabilized after 40 days to only 0.06 V (Figure 1). 3.2 Anode polarization curves PLEASE INSERT HERE FIGURE 2 To study the anode behavior independently of the cathode, the anode electrochemical response was measured using potentiodynamic polarization curves after 45 days of MFCs operation (Figure 2). Despite the fact that the vo tage achieved at 1000 Ω externa resistance after day 45 of MFCs polarization was approximately the same for N(CH3)3+-, COOH- and OH-MFCs, the different surface chemistry of the anodes results in a different anodic polarization behavior. Maximum current densities of 225-230 µA cm-2 were achieved by the –N(CH3)3+ modified anodes at approximately -0.40 V vs. Ag/AgCl. The –N(CH3)3+-anode demonstrated another peak

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The -N(CH3)3+-MFCs showed the highest anode current densities and shortest start up time most likely due to bacteria preference towards hydrophilic and positively charged surfaces in agreement with previous studies [7].

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We have previously demonstrated that different bacteria exhibit different attachment responses to SAMs [25-28]. -COOH and -OH- SAM generated much lower current densities relative to the N(CH3)3+-anodes. These data suggest that the surface chemistry directly affect microbial species and/or specific biofilm characteristics. Furthermore, the -COOH, -OH and -CH3-modified surfaces may limit biofilm development and electron transfer rate [7]. Cathode polarization curves showed that cathode performance was similar across all systems (Figure S1), indicating that MFC current output was controlled by the variations in anode performance. The performance of the cathodes decreased slightly after 45 days of operation for all MFCs tested (Figure S1). The decrease in the cathodic current might have resulted from biofilm development at the cathode (Figure S2) and by salt precipitations at the cathode [38] which also could introduce diffusional limitations and induce biofouling of the catalytic sites at the cathode-liquid interface.

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3.3 MFC polarization curves and power generation

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The overall performances of the MFCs were evaluated in terms of current and power produced to assess full system performance. The N(CH3)3+-, COOH- and OH-MFCs had similar OCV values at 550-565 mV and similar current output at potentials close to OCP until roughly 70 µA cm-2 (Figure 3.a). As the current densities increase, the I-U curves showed diffusion or metabolic limitations going into overshoot conditions [39]. Particularly, the OH-MFCs showed mass transfer control at roughly 70 µA cm-2 while the COOH-MFCs showed diffusion or metabolic limitations at roughly 125 µA cm-2 and the N(CH3)3+-MFC was limited by mass transfer at roughly 200 µA cm-2. The MFCs with –CH3 modified anodes had significantly lower OCPs (450 mV) and significantly lower short circuit currents of 5-7 µA cm-2. The N(CH3)3+-MFCs had a maximum power density of 40-41 µW cm-2 followed by COOH-MFC with 35-37 µW cm-2 and by OH-MFCs with 25-28 µW cm-2. The CH3-MFCs had the lowest performances with a Pmax of only 1.2 µW cm-2 (Figure 3.b). Comparison between Figure 2, Figure 3 and Figure S1 shows that MFC polarization measurements followed the same trends as the anode polarization curves, indicating that the short-circuit current in this configuration was limited by the anode rather than the cathode. 3.4 Anodic biofilm analysis PLEASE INSERT HERE FIGURE 4 7

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Pyrosequencing of 16S rRNA gene amplicons derived from the anode-associated biomass shows diverse bacterial populations at the different anode modified surfaces (Figure 4). Our findings show that the enrichment of electroactive biofilms on SAMs-electrodes operated in independent reactors yields different taxonomic compositions relative to previously reported studies [7]. A phylum-level analysis (Figure 4.a) indicates that phylum Proteobacteria comprised between 32 % and 37 % of the anode-associated biofilms. The -N(CH3)3+ modified surface featured Proteobacteria in a relative abundance of 36 %, the -COOH had 37 % relative abundance, and OH had 32 % relative abundance. The -N(CH3)3+ bulk solution (labeled as WW in Figure 4) also showed 37 % relative abundance of Proteobacteria. However, Proteobacteria only occupied approximately 6 % of the biofilm associated with the –CH3 modified anode. The phylum Firmicutes had a high relative abundance in all of the communities, between 21 % and 34 % of the biofilm. The biofilm associated with the -CH3-modified electrode had the highest relative abundance of Firmicutes at 34 %. Interestingly, Firmicutes have been identified in many different microbial fuel cell reports, including a particular strain (Firmicutes Thermincola sp. strain JR) that was isolated from thermophilic microbial fuel cells and was able to directly transfer electrons to an anode surface [40]. The phylum Bacteroidetes was present in all of the communities with relative community abundance of 22 % (-N(CH3)3+), 12 % (-COOH), 6 % (-OH), 13 % (-CH3) and 15 % (WW). The -CH3 modified anode also had a relatively high abundance of phyla Lentisphaerae (24 %) and Actinobacteria (19 %) as compared to the other samples. The class-level analysis of the anode communities shows that the phylum Proteobacteria featured class δ-Proteobacteria, β-Proteobacteria, γ-Proteobacteria, ε-Proteobacteria and αProteobacteria. Class δ-Proteobacteria had the highest relative abundance in the -N(CH3)3+, -COOH and -OH anode biofilms, and very low relative abundance in the -CH3 anode-associated biofilm and the -N(CH3)3+ bulk solution (WW). Several members of class δ-Proteobacteria and γ-Proteobacteria have been reported as electrochemically active microbes in bioelectrochemical systems [41-45]. The high relative abundance of class δ-Proteobacteria in all of the biofilms that showed good current and power output (-N(CH3)3+, -COOH and -OH), suggests that these community members are active in electron transfer to the anode surfaces. The -COOH anode-associated biofilm and the WW also featured a small percentage of class γ -Proteobacteria, which suggests that these community members might be active in multiple functions, including electron transfer to the anode and possibly fermentation of complex substrates in the bulk solution. The presence of class β-Proteobacteria in wastewater-enriched microbial fuel cells has also been reported by several MFC researchers [41-43, 46]; however, the functional role(s) of these microbes have not been comprehensively defined, and members of this class may perform multiple functions within the biofilm. Interestingly, all the reactors featured a high relative abundance of fermentative microbes including class Clostridia, Bacterioidia, Deferribacteres and Lentisphaerea. This result suggests that acetate was not the sole carbon source for the community and that residual complex carbon substrates from the activated sludge inoculum may also have been used as electron donors for the biofilm and planktonic communities. Members of class Clostridia, Bacterioidia, Deferribacteres and Lentisphaerea have been reported in several wastewater-enriched microbial fuel cells [4147], and we speculate that these organisms are critical for converting sugars and other complex

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substrates to simple volatile fatty acids that are the preferred carbons sources for electrochemically active δ- and γ- Proteobacteria . A more detailed sequencing effort is required to identify strain-level associations with the various electrode surface chemistries; however, the class-level analysis suggests that there may have been different community members contributing to electron transfer at the various chemicallymodified surfaces. The results strongly suggest that the surface chemistry (charge and hydrophobicity) of the -CH3-modified anode had the most effect on microbial taxonomic enrichment, which negatively impacted the overall system function. The lack of δ-Proteobacteria members and a higher relative abundance of diverse fermentative members (e.g. Bacilli, Lentisphaerae and Actinobacteria) correlates with the low electrochemical performance of the CH3-modified system, and suggests that fermentation was the primary function of this community. The data suggest that the hydrophilic and positively charged SAM-electrode (N(CH3)3+) induced a stronger selective pressure for δ-Proteobacteria. The amount of δProteobacteria was higher on the –N(CH3)3+ anode, followed by COOH, OH and CH3 modified anodes. A lower relative abundance of electrogenic bacteria may have induced methabolic limitations on the rest of the community (e.g. build up of volatile fatty acids will slow fermentation) leading to fast decrease of the generated current at lower potentials. Therefore in the case of OH and COOH MFCs the region in the polarization curves controlled by methabolic limitations starts earlier at lower current densities in comparison to the N(CH3)3+ system (Figures 2 and 3). Interestingly, the relative abundance of Proteobacteria associated with the –N(CH3)3+ anode found in this study (37%) was considerably lower than what was reported by Guo et al. (68%) [7]. We also observed that Firmicutes and Bacteroidetes phyla were much more abundant (one order of magnitude) relative to to Guo et al. [7]. Despite different relative abundances of bacterial phyla found on the surfaces, current production and start up times observed in this study were improved relative to Guo et al. [7]. This finding suggests that a diverse consortium might be more electroactive and efficient at substrate conversion relative to Geobacter spp., which is in agreement with Ishii et al. [48]. Further, in the Guo et al. study [7] all anodes were immersed in the same electrochemical cell with a modified M9 medium and acetate as the electron donor. The described reactor was inoculated with the effluent of an operational BES that was described in Dennis et al. and had been enriched for over one year [49]. Accordingly, the anode-associated biofilm described by Dennis et. al. featured a high relative abundance of Geobacter spp. (>62% relative abundance in the community), which was transferred to the reactor operated by Guo et al., having multiple electrodes with different surface properties exposed to the same inoculum and medium. The surface-modified anodes were consistently polarized at a constant potential of -0.2 V vs Ag/AgCl (3.5 M KCl) and Guo et al. found more biomass attachment on hydrophilic and positively charged surfaces, which was directly related to the current output [7]. However, all the microbial biofilms found on the anodes contained over 68% of Geobacter spp. known to be electrochemically active microorganisms. While our experimental setup was different to reflect a less electrochemically controlled enrichment, our study found similarities, in that the most positively charged and hydrophilic surface attracted a higher relative abundance of δProteobacteria. Interestingly, this finding was observed in duplicate MFC reactors inoculated with activated sludge (not previously enriched inoculum) and operated without poised potential addition or the interference of shunt-currents, which are induced when anode electrodes are operated in a shared media.

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A 16S-rRNA sequence analysis of the cathode biofilms showed that the taxonomic composition of each cathode was fairly similar across the experimental conditions (Figure S2); however, the cathode populations were significantly different than the anode biofilms analyzed from the same reactors.

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3.5 PCA, relationship between surface chemistry, electrochemical output and anodic microbial community

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As has been previously discussed, due to the complexity of MFCs and the abundance of factors determining the overall system performance and their intercorrelation, ascribing the observable variations in the MFC output to only one parameter is highly incorrect. Thus, although in this study we intentionally varied only one parameter (anode surface chemistry), the differences in the MFCs behavior cannot be attributed to the impact of only this variable. As we demonstrated, the variations in the anode surface chemistry led to differences in surface hydrophobicity (Table S1), surface charge as well as taxonomic composition on the anodes (Figure 4), all leading to different MFC behaviors.

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Principal Component Analysis was used to estimate correlations between the different factors affecting the tested MFCs and their operational characteristics, such as current and power output, start up and steady-state time. Steady-state time is defined as the time necessary for the system to reach steady-state current when the MFC is subjected to a constant external load in abundance of a carbon source. Since the cathode was not the limiting electrode, parameters associated with the anode operation were taken into account for the PCA analysis.

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PCA separates the variables and the samples into three groups (Figure 5). The first group contains the -N(CH3)3 MFC with the highest current and power densities and the shortest start up and steady-state times. The parameters contributing to the higher performance of the -N(CH3)3 anode and MFC, respectively, are the positive charge of the surface groups and the presence of higher amounts of bacteria from the classes of δ-Proteobacteria and Clostridia. Although, among the tested hydrophilic surfaces the N(CH3)3+ has the least pronounced hydrophilicity, it can be seen that its positive charge facilitates attachment of negatively charged bacteria at circumneutral pH values. So far it has been considered that a high relative abundance of δ-Proteobacteria in the bacterial biofilm [7, 41-42] leads to enhancement of the anodes electrical output, as this bacterial class includes several electrochemically active species. However, in this study due to the complexity of the carbon compounds in wastewater, a consortium between Clostridia and δProteobacteria have been identified as a key aspect for increased electrochemical performance of the MFCs. The second group contains –COOH and –OH modified MFCs. Both are characterized with high hydrophilicity and lower relative abundance of δ-Proteobacteria and Clostridia. Contact angles measurements in ultrapure water showed similar values for –OH (27±1°), -COOH (19±1°) and slightly higher, but still in hydrophilic range for -N(CH3)3+ (51±4°). SAMs despite having differently charged surfaces while the -CH3 SAM had a much higher values (102±2°) (Table S1). At the pH of wastewater used in this study, it is not entirely clear if the -COOH group from the SH(CH2)10COOH is deprotonated or not. The pK1/2 of HS(CH2)10COOH has been found to be 7.4 and the pH of the electrolyte in this study was 7.4-7.5. Crittenden et al. suggested that the carboxylic acid terminus of SAMs can interact with the peptide bonds in proteins via strong hydrogen bonds [50]. Thus, -COOH could bind outer membrane and enhance electron transfer in electrochemically active microorganisms. 10

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The –CH3 modified anode surface represents the third group. This group exhibits the longest start up and steady-state times, no δ-Proteobacteria, and most importantly, a hydrophobic character of the anode surface. The electron transfer rate at the biofilm/electrode interface along with the bacteria attachment depends on the hydrophilicity of the electrode surface. The variations in the surface hydrophilicity affect the electrolyte-electrode interactions, as shown by using a ferricyanide probe (Table S1), where increased hydrophobicity decreases the contact between the electrode and the electrolyte and thus lower the charge transfer rate at the biosupport interface. As a result of the decreased charge transfer ability of the electrode surface the generated current also decreases. PLEASE INSERT HERE FIGURE 5

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There is not a clear separation between the impact of the microbial population and the physical properties of the e ectrode surface on the MFCs’ fina output. Therefore, it should be appreciated that both of these factors are equally important when MFCs are designed and studied. It is also reasonable to say that the physical properties of the electrodes are affecting the microbial community in the formed biofilm. Figure S3 shows a qualitative path analysis of the factors intercorrelations, where the electrodes surface chemistry directly determines electrodes hydrophobicity and surface charge. Consequently the hydrophobic/hydrophilic properties of the surface define the electrode-electrolyte contact and thus charge transfer ability as well as bacterial attachment and biofilm formation. Electrodes surface charge on the other hand also influences bacteria attachment. Variation in charge transfer abilities of the electrodes implies the generated current and power densities. In parallel, the types of bacteria present in the wastewater microbial population will greatly influence biofilm formation and the types of bacteria able to participate in the electron transfer, both very important parameters for successfu MFC’s operation. 4. Conclusions

Hydrophilic/hydrophobic SAM-modified gold anodes, harboring positive or negative functional groups, determine the current and power output of MFCs. Electrochemically active microorganisms attach preferentially on hydrophilic and positively charged surfaces. In fact, N(CH3)3+ modified anodes showed the shortest start-up time, the highest current and power densities and the fastest electron transfer rates among the materials investigated. Pyrosequencing showed the highest percentage of δ-Proteobacteria on -N(CH3)3+ modified anodes, most likely responsible for direct electron transfer at the biofilm/electrode interface. A consortium of Clostridia and δ-Proteobacteria was identified as a key aspect for increased MFC’s electrochemical performance under the conditions tested, which warrants further investigation. A clear separation between the impact of the microbial population and the physical properties of the electrode surface on the MFCs’ fina output cannot be made due to the intercorrelation of these factors. Both these factors are equally important when MFCs are designed and studied. Ackowledgements This project is funded by the Army Research Office Award W911NF-12-1-0208. References

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Samples Operational characteristics Bacteria other Clostridia Proteobacteria Contact angle Charge transfer Surface charge

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ACCEPTED MANUSCRIPT Figure 1. Voltage trends of duplicate MFCs operated with different SAMs-modified gold anodes over 45 days of operation. Plain and dot lines indicated the replicates.

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Figure 2. Anode polarization curves for duplicate MFC systems featuring different SAMsmodified anodes after 45 days operations. The scan rate was 0.2 mV s-1. Plain and dot lines indicated the replicates.

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Figure 3. Cell polarization (I-U) curves (a) and power curves (b) of MFCs with SAMs-modified anodes. Plain and dot lines indicated the replicates.

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Figure 4: Phylum-level taxonomic distribution of 16S rRNA community profile within anode electrochemically active biofilm (a) and class-level taxonomic profile of 16S rRNA community profile within anode electrochemically active biofilm (b).

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Figure 5: PCA biplot where scores (samples) and loadings (variables) for MFCs with different anode surface chemistries are plotted on the first two components, where Isc is the short circuit current of MFCs, SS time is steady-state time, C angle is contact angle, anode and cathode current and overall power generation.

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The influence of anodes surface chemistry on MFCs performance was studied. Different SAMs substratum affects the composition of the electroactive biofilm. Positive charged surface modification with enhances electrochemical output. –N(CH3)3+ had shortest start up and highest current (225 μA cm-2) and power generated (40 μW cm-2) Clostridia and δ-Proteobacteria on the anode surfaces suggests a synergistic cooperation.

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Influence of anode surface chemistry on microbial fuel cell operation.

Self-assembled monolayers (SAMs) modified gold anodes are used in single chamber microbial fuel cells for organic removal and electricity generation. ...
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