AEM Accepted Manuscript Posted Online 29 May 2015 Appl. Environ. Microbiol. doi:10.1128/AEM.01042-15 Copyright © 2015, American Society for Microbiology. All Rights Reserved.
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Title: Dual color bioluminescence imaging for simultaneous monitoring of intestinal
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persistence of Lactobacillus plantarum and Lactococcus lactis in living mice
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Catherine Daniela, b, c #, Sabine Poireta, b, c, Véronique Dennina, b, c, Denise Boutilliera, b, c, Delphine
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Armelle Lacorreb, c, d, e, Benoit Folignéa, b, c and Bruno Pota, b, c
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Lactic acid Bacteria and Mucosal Immunity team, Institut Pasteur de Lille, Center for Infection
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and Immunity of Lille, F-59019 Lille, Francea; Université de Lille, F-59000 Lille, Franceb;
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CNRS, UMR 8204, F-59021 Lille, Francec; BioImaging Center Lille-Nord de France, F-59800
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Lille, Franced; Cellular Microbiology and Physics of Infection, Institut Pasteur de Lille, Center
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for Infection and Immunity of Lille, F-59019 Lille, France e
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# Corresponding author: Daniel, C. (
[email protected])
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Running title: Dual color bioluminescent lactic acid bacteria
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Journal section: Methods
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ABSTRACT:
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Lactic acid bacteria are found in the gastrointestinal tract of mammals and have received
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tremendous attention due to their health-promoting properties. We report the development of two
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dual color luciferase-producing Lactobacillus plantarum and Lactococcus lactis for noninvasive
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simultaneous tracking in the mouse gastrointestinal tract. We previously described the functional
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expression of the red luciferase mutant (CBRluc) from Pyrophorus plagiophtalamus in L.
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plantarum NCIMB8826 and L. lactis MG1363. In this study, we determined that CBRluc is a
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better performing luciferase for in vivo localization of both lactic acid bacteria after oral
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administration, as compared with the green click beetle luciferase mutant construct developed in
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this study. We furthermore established the possibility to simultaneously detect red and green
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emitting lactic acid bacteria by dual wavelength bioluminescence imaging in combination with
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spectral unmixing. The difference in spectra of light emission by the red and green click beetle
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luciferase mutants and dual bioluminescence detection allowed in vitro and in vivo quantification
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of the red and green emitted signals and thus monitoring the dynamics and fate of the two
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bacterial populations simultaneously. Persistence and viability of both strains simultaneously
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administered to mice in different ratios was studied in vivo in anesthetized mice and ex vivo in
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mouse feces. The application of dual-luciferase-labeled bacteria has considerable potential to
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simultaneous study the interactions and potential competitions of different targeted bacteria and
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their host.
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INTRODUCTION
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Lactococci and lactobacilli are lactic acid bacteria (LAB) that have been used for thousands of
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years for the production and preservation of fermented food such as milk, vegetables and meat.
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Some specific strains are commercialized as probiotics and claimed to have health-promoting
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properties (1). The gastrointestinal tract (GIT) is the most important field of activity of LAB
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although distal effects outside the gut have been described (2). It is thus important to understand
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the interactions of the administered bacteria with their host GIT system. LAB are able to survive
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and adapt to the GIT conditions, as shown by comparative and functional genomic
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characterization of various human isolates, essentially lactobacilli (for a review, see references (2,
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3)). Some LAB, when present in the GIT of mice or humans, express a number of common
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characteristics that may relate to their intestinal niche adaptation (3, 4). However, direct in vivo
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tracking of these actions in terms of both spatial and temporal evolution would allow a better
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understanding of the survival and metabolic activities of these LAB in the gut.
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In the past decade, bioluminescence imaging (BLI) has become essential for in vivo
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noninvasive monitoring of biological processes (4). The technique relies on the detection of
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photons emitted from cells or tissues in a living organism. Bioluminescence is a biological
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process that requires an enzyme known as luciferase, an enzyme-specific substrate (e.g.
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luciferin), oxygen, magnesium and / or ATP, depending on the luciferase. Luciferases encompass
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a wide range of enzymes that catalyze light-producing chemical reactions in living organisms.
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The most used luciferase for in vivo bioluminescence imaging is represented by the Photinus
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pyralis (firefly) luciferase (Fluc) and the click beetle luciferase from Pyrophorus
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plagiophtalamus (CBluc). Both use D-luciferin as the substrate, depend on ATP, Mg and O2 and
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result in the production of green light. Red click beetle (CBRluc) and firefly luciferase variants
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with higher emission wavelengths have also been developed and greatly enhance the penetration
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and sensitivity of BLI in deep tissues (4). We previously showed that CBRluc produced in
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Lactobacillus plantarum NCIMB8826, one of most studied strains in LAB research, and
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Lactococcus lactis MG1363, a dairy starter derivative, can be successfully detected in the GIT of
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anesthetized mice by noninvasive BLI after oral administration (5).
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It has been reported that dual color BLI can be applied in vitro and in vivo using appropriate
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emission filters for the separation of bioluminescent signals and mathematical corrections for
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their deconvolution using spectral unmixing algorithms (6-8). Dual color bioluminescence has
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been described with red and green luciferases expressed by mammalian cells that can be
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separated in vivo (9). Very recently, Chang et al. showed that Fluc and CBRluc, which emit
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distinct light wavelengths, allow simultaneous imaging of two mycobacterial strains during
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infection (10).
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As LAB are studied and given to humans and animals mostly in mixtures with multiple strains
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(11), we describe the development and application of two dual color luciferase-expressing L.
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plantarum and L. lactis for noninvasive simultaneous monitoring in the GIT of small laboratory
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animals. We demonstrate that CBRluc is a better performing luciferase in vivo, as compared with
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the green click beetle luciferase (CBGluc) mutant also described in this study. We also explore
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the possibility to simultaneously detect red and green emitting LAB by dual wavelength
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bioluminescence imaging in combination with spectral unmixing.
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MATERIALS AND METHODS
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Bacterial strains, plasmids and growth conditions. Bacterial strains and plasmids are listed in
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Table 1. The L. plantarum codon-optimized cbgluc gene under the control of Pldh and the L.
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lactis codon-optimized cbgluc gene under the control of Pusp45 (the two DNA fragments were
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synthetized by Eurogentec, Belgium) were cloned into pNZ8148 as BglII-XbaI fragments,
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respectively. The two resulting constructs were subsequently introduced into L. lactis MG1363
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and L. plantarum NCIMB8826 by electrotransformation, as described elsewhere (12) and named
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L. lactis-CBGluc (Ll-CBGluc) and L. plantarum-CBGluc (Lp-CBGluc), respectively. L. lactis
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MG1363 and L. plantarum NCIMB8826 containing the empty vector pNZ8148 (named Ll-
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pNZ8148 and Lp-pNZ8148, respectively) described previously (5) served as controls in all the in
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vitro and in vivo experiments. Lp-CBRluc and Ll-CBRluc were described previously (5). Strain
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stability was tested as described previously (13).
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Escherichia coli was cultured in Luria–Bertani broth at 37°C. L. lactis was grown at 30°C in M17
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medium (Difco, Becton Dickinson, Sparks, MD) supplemented with 0.5% of glucose. L.
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plantarum was grown at 37°C in MRS medium (Difco, Becton Dickinson). Chloramphenicol
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(Sigma-Aldrich, St Quentin Fallavier, France) was added to culture media for bacterial selection
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when necessary, at a final concentration of 20µg/mL for E. coli and 10µg/mL for LAB strains.
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In vitro bioluminescence measurement. The bioluminescence of each recombinant luciferase
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was quantified as described previously (5). Briefly, recombinant bacteria were grown overnight,
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harvested by centrifugation, and washed with phosphate-buffered saline (PBS). 50 µl of each
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culture adjusted to approximately 2.5 × 1011 CFU/ml was distributed in black microplates (Nunc,
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Thermo Fisher, NY, USA) and imaged after addition of 50µl of the Bright-Glo Luciferase
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(Promega, Madison, WI, USA). Luminescence was measured at room temperature on the IVIS
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Lumina XR imaging system (Perkin Elmer, Alameda, CA, USA) using the Living Image
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software (Perkin Elmer). Each individual well was manually selected as a region of interest
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(ROI). Strains were compared on the basis of total flux of emitted light expressed as photons per
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second (p/s) measured per 1.2 × 1010 CFU of each bacterial culture. L. lactis MG1363 and L.
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plantarum NCIMB8826 containing the empty vector pNZ8148 were used to measure the
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background luminescence.
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Preparation of bacteria and administration to mice. Bacterial strains were grown
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overnight, harvested by centrifugation, and washed with PBS. Mice received 5 × 1010 CFU in
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200µl gavage buffer (0.2 M NaHCO3 buffer containing 1% glucose, pH 8). Eight-week-old
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female BALB/c mice were purchased from Charles River (St Germain sur l’Arbresle, France).
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Experiments were performed in an accredited establishment (no. A59107; Institut Pasteur de
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Lille) according to European guidelines (number 86/609/CEE), and animal protocols were
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approved by the local ethics committee.
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In vivo persistence of LAB in the GIT of mice. Groups of five mice received a unique, daily
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dose of 5 × 1010 CFU of live recombinant strains (Lp-CBRluc, Ll-CBRluc, Lp-CBGluc, or Ll-
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CBGluc) or different doses of the two different recombinant strains (one expressing CBRluc and
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the other CBGluc) administered for four consecutive days by oral gavage. Control mice received
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Lp-pNZ8148 and Ll-pNZ8148 in the different experiments. Fecal samples were individually
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collected at different time-points and mechanically homogenized in PBS. No chloramphenicol-
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resistant bacteria were detected in non-inoculated mice. Mice were anesthetized with 2%
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isoflurane and sacrificed by cervical dislocation and mouse digestive tracts were immediately
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excised before ex vivo bioluminescence imaging. As described previously, the intestines were
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injected with air to enhance the bioluminescent signal (5). Experiences were repeated twice.
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In vivo bioluminescence imaging. Bioluminescence imaging was performed using a
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multimodal IVIS Lumina XR imaging system (Perkin Elmer) as described previously (5). Mice
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were anesthetized with 2% isoflurane and D-luciferin potassium salt (Perkin Elmer) was
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administered to animals, intragastrically 15 minutes before the oral administration of the bacteria.
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Two hours later, mice were placed into the specimen chamber of the IVIS imaging system where 6
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a controlled flow of 1.5% isoflurane was administered through a nose cone via a gas anesthesia
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system (Tem Sega, Lormont, France). A grayscale reference photography under low illumination
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was taken as an overlay prior to detection of emitted photons over 1s to 5 min, depending on
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signal intensity and using the Living Image software (Perkin Elmer). A pseudocolour image
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representing detected light intensity was generated using the Living Image software and
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superimposed over the grayscale reference photography. For each individual mouse, the ROI
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corresponding to the mouse digestive tract was manually selected.
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In vitro and in vivo spectral unmixing of emission wavelengths. To separate the red
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bioluminescent signal (CBRluc with an emission peak at 620 nm) from the green signal (CBGluc
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with an emission peak at 540 nm) in mixed cultures of L. lactis and L. plantarum, either (i) in
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vitro in microplates, (ii) in vivo in mice after co-administration of both strains by oral gavage,
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(iii) ex vivo on dissected GITs, or (iv) directly in feces, images were taken using a set of 20 nm
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step emission filters (500 Series high spectral resolution emission filters, Perkin Elmer) from 500
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nm to 620 nm. The Living Image software was used for generating spectrally unmixed images
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and quantification of each signal.
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RESULTS
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In vitro comparison of the production of CBGluc and CBRluc in L. lactis and L. plantarum.
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The bioluminescent signals produced by the different recombinant L. lactis and L. plantarum was
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quantified and compared in vitro on bacterial cultures adjusted to 2.5 × 1011 CFU/ml (Fig. 1).
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Results show that maximum bioluminescence is obtained with Lp-CBRluc and Lp-CBGluc with
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mean values of 5.1 × 1010 and 4.1 × 1010 p/s (per 1.2 × 1010 CFU, equivalent to 50µl of bacterial
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culture). Approximately 36-fold lower bioluminescent signals were obtained with L. lactis strains
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producing CBGluc and CBRluc. No statistical difference was found between the production of 7
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CBGluc and CBRluc for the respective strains. In L. lactis and L. plantarum, plasmids 271 and
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269, respectively, were remarkably stable with 100% of bioluminescent colonies even after
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approximately 100 generations (10 subcultures) in non-selective medium.
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As observed earlier for CBRluc-producing strains (5), there was an excellent correlation
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between CFU counts and in vitro bioluminescent signals from CBGluc-expressing strains (data
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not shown). The bioluminescence system allowed the detection of bacterial amounts as low as 5
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× 104 CFU/ml for Lp-CBGluc [similar to Lp-CBRluc (5)] and 5 × 105 CFU/ml for Ll-CBGluc
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[similar to Ll-CBGluc (5)].
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Comparison of the persistence of CBGluc- and CBRluc-producing L. lactis and L.
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plantarum in the digestive tract of mice after 4 daily oral administrations. As we had
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previously shown that differences in bacterial persistence in mice are more pronounced after
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multiple daily oral administrations (5), groups of mice were given a daily dose of 5 × 1010 CFU
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of each recombinant strain for four consecutive days. The bioluminescent signal was quantified
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each day by direct imaging in 5 anesthetized mice (Fig. 2). The same mice were used during the
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whole experiment. The signal was very strong for the four strains on day 1 and remained at a
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similar level till the last day of oral administration (day 4). Results show that from day 1 to day 4,
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Lp-CBRluc emitted the highest bioluminescent signal (mean value of 1.2 × 108 p/s), 6-fold higher
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than Lp-CBGluc, 14-fold higher than Ll-CBRluc and 111-fold higher than Ll-CBGluc. Signals of
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both L. lactis strains decreased to background level at day 5, whereas signals of both L.
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plantarum strains decreased to background level only at day 7.
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Simultaneous monitoring of red and green bioluminescent signals by dual color in vivo
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imaging. In order to test the CBRluc/CBGluc pair of luciferases for in vivo applications, groups
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of mice were orally given a dose of Lp-CBRluc, Lp-CBGluc, or a mixture (50/50) of L. 8
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plantarum expressing CBRluc and expressing CBGluc for four days. The bioluminescent signal
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was measured each day in mice and a series of images at different wavelengths ranging from 500
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to 620 nm were acquired (Fig. 3A) Representative images of a spectral unmixing of the red and
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green signals are shown in Figure 3. The respective red and green signals are separated and
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quantified after applying the spectral unmixing algorithm to the acquired images series. The
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resulting Unmix1 image displays the green signal from Lp-CBGluc while the resulting Unmix 2
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image displays the red signal from Lp-CBRluc (Fig. 3B). The red signal was not detected in the
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green emission light image and the green signal was not detected in the red emission light image
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which confirmed the good spectral unmixing of both signals. Moreover, both signals were
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detected in mice administered with a mixture of Lp-CBRluc and Lp-CBGluc.
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Simultaneous monitoring of red and green bioluminescent signals after co-administration
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of L. plantarum-CBRluc and L. lactis-CBGluc by dual color in vivo imaging. In order to
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simultaneously study the persistence of L. plantarum and L. lactis in mice, groups of mice were
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orally given a daily dose of Lp-CBRluc, Ll-CBGluc, or different mixtures (20/80, 50/50 and
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80/20) of Lp-CBRluc/Ll-CBGluc for four days. We found that red signals in mice administered
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with a mixture of 50/50 or 80/20 of Lp-CBRluc/Ll-CBGluc, are similar to red signals of mice
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administered with 100% Lp-CBRluc (no statistical difference) from day 1 to day 6 (Fig. 4A). The
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same observation was made for green signals in mice administered only with Ll-CBGluc (Fig.
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4B). However, red signals in mice administered with L. plantarum only are statistically higher
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than red signals in mice administered with a mixture of 20% of L. plantarum/80% of L. lactis
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from day 1 to day 6. Similarly, green signals in mice administered with 100% L. lactis are
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statistically higher than green signals in mice administered with a mixture of 20% of L.
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lactis/80% of L. plantarum. The values of red signals from L. plantarum given alone (mean value
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of 1.4 × 108 p/s from day 1 to day 4) are statistically higher than green signals from L. lactis
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given alone (p