Vol. 87, No. 1, 1979

8lOC3iEMlCAL

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

March 15, 1979

Pages 343-348

4-NITRO-L-HISTIDINE AS A SUBSTRATE FOR HISTIDINE AMMONIA-LYASE: THE ROLE OF S-HYDROGEN ACIDITY IN THE RATE-LIMITING STEP Claude B. Klee* of Biochemical Pharmacology

Laboratory

Kenneth L. Kirk Laboratory

and Louis A. Cohen of Chemistry

National Institute of Arthritis, Metabolism and Digestive National Institutes of Health, Bethesda, Maryland

February

Received

Diseases, 20014

1,19i'9

Summary: The Km for the interaction of 4-nitro-L-histidine with histidine ammonia-lyase (reduced enzyme, pH 8.0) is comparable to that for L-histidine, while Vmax is l/S that for the natural substrate. With the analog, addition of Cd+2 effects a small decrease in I$a but fails to alter Vmax; the normal deuterium isotope effect for removal of the S-hydrogen (1.5-2.0) is eliminated; and enzyme-catalyzed incorporation of solvent tritium into substrate occurs to a much greater extent than into histidine. Thus, the nitro group increases the acidity of the B-hydrogen and the stability of the conjugate carbanion to such a degree that C-H bond cleavage now precedes rate-limiting C-N bond cleavage.

X=H,F,N02

The detailed respect metal

ion,

certainty

(1).

We had previously

of ammonia

from the

of a small,

initial

of activity,

burst histidine

Present +

is

address:

The nature prosthetic

of histidine

somewhat

group

group--has

atom is at least

demonstration into

of action

of the prosthetic

and a sulfhydryl

g-hydrogen tion

mechanism

to the roles

yet

substrate but

than

argument

isotope

and the observation amino

that

a transition with

reasonable

abstraction

in the rate-limiting

This

reproducible,

faster

(2)

involved (I).+

unidentified),

to be elucidated

demonstrated

partially

ammonia-lyase--with

(yet

that acid

is

of a elimina-

supported

by the

effect,

the absence

solvent

tritium

regeneration

of an

exchange

from urocanate.

*

Laboratory of Biochemistry, National Cancer Institute, National Institutes of Health, Bethesda, Maryland 20014 of the interaction between the a-amino group and the enzyme's group is not specified in the structural formulas. 0006-291X/79/050343-06$01.00/0 343

Copyright All rights

@I 1979 by Academic Press, Inc. of reproduction in any form reserved.

BIOCHEMICAL

Vol. 87, No. 1, 1979

4-Fluoro-L-histidine enzyme,

was found

as well

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

to be a strong

as a weak substrate.

competitive

The addition

inhibitor

for

the

of Cd+2 has a stimulatory

effect, both for histidine and for its 4-fluoro analog; while the enhancement for fluorohistidine than for histidine, effect of Cd+2 on Km is Ca. 40% greater its effect on V,, is almost 4-fold as great for the analog. This result suggests

that

ammonia

the metal

from

electronic

ion

plays

fluorohistidine,

grounds.

whether

it

have

coupled

to the

a somewhat and fits

The carbanion

the lifetime

more critical

a pattern

formed

which

by B-proton

of an intermediate

substituent

at C-4 both

role

in the removal

can be rationalized abstraction

or a transition

by induction

of on

(II), state,

is

and resonance.

There are indications (3,4) that the electron-releasing resonance effect of fluorine should surpass its inductive effect in such a system, with the result that the fluorine relative have in

atom at C-4 will to that

examined

the latter

group

operate

enhancement MATERIALS

decrease

of histidine.

the acidity

As a logical

test

of the for

this

S-hydrogen interpretation,

the action

of histidine

ammonia-lyase

on 4-nitro-L-histidine;

compound,

the resonance

and inductive

effects

in

the same direction

of B-hydrogen

acidity

and should

produce

atom we

of the nitro

a significant

(5).

AND METHODS:

4-Nitro-L-histidine was prepared as previously &scribed (6). A sample of this compound was stored in 1N NaOD for 2 days at 60'; at this point, the NMR spectrum indicated complete exchange of the B-hydrogens. The solution was acidified to pH 3 and the crystalline, deuterated amino acid was isolated by filtration. Exposure to alkali did not effect racemization at the a-carbon atom, since the deuterated product was totally transformed to nitrourocanate by the enzyme. 4-Nitrourocanic acid was obtained by enzymatic deamination of 4-nitrohistidine. The final reaction mixture was acidified to pH 1 and the crystalline product was separated by filtration, mp 255-263“; --m/e 169. Histidine ammonia-lyase from Pseudomonas ATCC 11299b was prepared as The enzyme was assayed spectrophotometrically at previously described (2,7). as substrate (8). Tbe UV absorption spectra of 277 nm and 25', with histidine 4-nitrohistidine and 4-nitrourocanate show large p&dependent changes between formation of 4-nitrourocanate was pH 7.4 and 9 (Table I); accordingly, followed at different wavelengths depending on pH. The wavelength was chosen to provide maximum UV difference spectra and low absorption of the substrate: 400 nm at pH 8.9-9; 260 nm at pH 8.0; and 370 nm at pH 7.4. UV difference spectra were corrected for the effect of CdC12 on the spectrum of 4-nitrohistidine; the metal ion had no effect on the spectrum of 4-nitrourocanate. The UV spectrum of 4-nitrourocanate is affected by the presence of thiols, and 2-mercaptoethylamine could not be used directly in the assay mixtures. For these studies, the enzyme was reduced and freed of thiol prior to activity Kinetic constants were determined as described (2). measurements (2). RESULTS AND DISCUSSION: With is

histidine

comparable

to that

ammonia-lyase of L-histidine,

at pH 8.0, the Km for and the analog is

344.

4-nitro-L-histidine deaminated at l/8

the

BIOCHEMICAL

Vol. 87, No. 1, 1979

Table

1.

Absorption

Spectral

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Data for 4-Nitrohistidine

and 4-Nitrourocanate.

4-Nitrohistidine Medium

A

pH 9.0)

Tris-IX1

(O.lM,

Tris*HCl

(0.1 M, pH 8.0)

K2HP04 (0.05 M, pH 7.4)

Table

2.

Urocanate

Em x 10

nm

max’

Histidine 4-Fluorohistidine 4-Nitrohistidine

x

Em x 10 -3

nm

IMX’

342

5.58

378

8.68

315

5.55

345

8.40

312

6.11

342

9.18

Formation

from Histidine

and its

Analogs. VlMX

Km bW pH 8.0 pH 8.8

Substrate

4-Nitrourocanate -3

pH 7.4

pH 8.8

pH 8.0

22.80

12.50 0.13 1.60

2.8

1.9

2.0

1.4

0.8

1.0

0.18

4.2

2.1

0.7

1.70

pH

7.4

9.30 0.06

0.94

Reactions were performed in 0.1 M Tris-HCl (pH 8.8 and 8.0) and 0.05 M potassium phosphate (pH 7.41, in the presence of 0.1 mM CdC12. Incubation, at 25', waa started by addition of the substrate; the concentration of reduced enzyme was 10 ug per ml. At high substrate concentrations (0.263 mM), reactions were performed in 2 mm pathlength cuvettes and the enzyme concentration waa raised to 30 ug per ml. V,, is expressed in umoles product/min/mg enzyme.

rate

of the natural

compound in Km with anionic

increasing

Reduction

in both

The value of pK2 for the nitro is Lca 9.5; thus, the marked increase inferior binding (or nonbinding) of the

in catalysis. removal

It were

enzyme,

group

in the presence

found

that

in the rate-limiting with

Km and V,,,

4-nitro-L-histidine are

and a more active per

of added

ion appears therefore,

has been suggested

of the B-proton

results

an oxidized

one sulfhydryl

deamination

max of the metal zyme , addition group is presumed necessary,

ent

II).

anion)

pH may reflect

exists

liberates

for

oxidized

(Table

-f imidazole

species. The lyase

V

substrate

(imidazole

subunit,

to increase the metal step

both

with

the oxidized

V max alone. a metal-ion ion (9).

serves

Km and en-

The sulfhydryl dependent step to facilitate

Significantly

as substrate

the same in the presence

345

form.

improving

Cd+2 (7);

to promote

reduced

(10).

differWith

of EDTA or Cd+2

the

BIOCHEMICAL

Vol. 87, No. 1, 1979

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

B 100 l/V

/

I 2

0

1 1 4 6 0 I / [4-NOZ-L-histidine]

Figure 1. Effect of Metal ion reactions were carried out in 0.1 mM CdC12 (0) or 1 mM EDTA A, oxidized enzyme; B, reduced increase in absorbance at 260

(Fig.

lA);

overall

with

rate

rating

the

reduced

of deamination

concentrations

in Km.

Thus,

it

dependence

on metal

the acidity

of the

precedes

ion

for

the rate-limiting

Replacement deuterium

the g-hydrogen

a small

(Fig.

enhancement

lB),

of the

but

this

and is derived,

that

the

proton

4-nitro

abstraction

to such an extent

g-hydrogens

in modest

respectively

6

increase

group or,

at satu-

from a reduction

has either

eliminated

more likely,

that

in the

vanishes

therefore,

The

the

has enhanced

carbanion

formation

now

step.

of the

results

and 2.0,

enzyme Cd+2 effects

appear

S-proton

4

on the deamination of 4-nitro-L-histidine. 0.05 M HEBES-NaOH buffer (pH 7.7) containing (0). The enzyme concentration was 20 ug/ml: enzyme. The velocity is expressed as the nm/min.

of substrate would

2 (mM-‘1

(2).

of histidine

and of 4-fluorohistidine

reductions

in Vmax, with

isotope

This

is

with

our

than

that

fluoro

trend

compound

is

consistent less

acidic

incorporation

of solvent

tritium

into

of 1.5

argument

that

of histidine.

effect is found for the 4-nitro analog (Fig. 2), providing -No isotope evidence for a change in rate-limiting step with this substrate. The enzyme-catalyzed

with

effects

the

further g position

of histidine

and of 4-fluorohistidine demonstrates the reversibility of the With 4-nitrohistidine, the rate of tritium incorporation lyase reaction (2). relative to product formation is 2-3 times as great as for the other subThis result is also consistent with a change in ratestrates (Fig. 3). a significant degree of stability for the carbanion limiting step, and implies

species

in

the nitro

The ability well-established

case.

of the nitro (ll), and is

group to stabilize a carbanion responsible for the acidities

346

by resonance of nitromethane

is

BIOCHEMICAL

Vol. 87, No. 1, 1979

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

60'/"

I

2

3

I / [4-NOy L-histidine]

4 (mM-’

1

Figure 2. Deuterium isotope effect on the rate of deamination of 4-nitro-Lhistidine. Assays were performed at 25" in 0.05 M HEPES-NaOH buffer (pH 7.6) containing 1 mM EDTA. The reaction was started by addition of oxidized The concentration of substrate was histidine ammonia-lyase (20 ug/ml). measured spectrophotometrically at 312 nm or, after conversion to 4-nitrois expressed as the increase in absorbance urocanate, at 342 nm. The velocity 4-nitro-L-histidine (0). Km = 1.27 + 0.27 mM, Vmax = 0.71 2 at 260 nm/min: 0.09; 6-D2-4-nitro-L-histidine (o), Km = 1.36 + 0.18 mM, Vmax = 0.69 + 0.06.

25

0 TIME

(mm)

Figure 3. Rates of incorporation of solvent tritium into L-histidine, 4-fluoro-L-histidine, and 4-nitro-L-histidine during the histidine ammonialyase reaction. The incubation mixture contained 0.05 M HEPES-NaOH buffer (pH 8), 1 mM mercaptoethylamine, O.lmM CdC12, 4.5 mCi of 3H20, and 32 ug/ml of enzyme. The mixtures were incubated for 10 min at 25' prior to addition of substrate (final concentration 30 mM). At the indicated times, aliquots were removed and incorporation of tritium from water was measured as previously described (2). The formation of 4-nitrourocanate was measured at 400 nm after appropriate dilution in 0.05 M Tris-HCl buffer (pH 9). After repeated lyophilizations of the incubation mixture, 70% of the residual radioactivity was associated with 4-nitrohistidine by thin-layer chromatodemonstrations for the other substrates were described gwhy . Similar previously (2). (pK 10.2) able

and p-nitrotoluene

to the carbanion

6-hydrogens Methods).

is

readily

Indeed,

(pK 28.7)

(5).

of 4-nitrohistidine, achieved

the facility

The same stabilization since

in 1 N aqueous of this

exchange

347

isotope base in

exchange

(see Materials the presence

is

avail-

of the and of the

BIOCHEMICAL

Vol. 87, No. 1, 1979

Table

3.

Effect

of Metal

AND BIOPHYSICAL RESEARCH COMMUNICATIONS

Ion on Lyase Activity. Activity

Substrate

Enzyme

Histidine (1.25 u&f) Histidine (1.25 a&I) Nitrohistidine (1.30 r&l) Nitrohistidine (1.30 mN) aExpressed

imidasolate

as umoles

anion for

the

--metal

ioncatalysis,

8-hydrogens,

increases,

effect

(2).to

histidines

is

relationship

of a substituent

in progress,

0.57

0.36

at pH 7.7.

step

effect,

acidity

+ 1 mM EDTA 0.56 0.56 0.29

indicates

isotope

a

4.74 7.81 0.31

an estimated

the kinetic

C-N cleavage throughout

with

deuterium

the rate-limiting

breaking

enzyme

= 1 hr at 60')

in relating

the electronic

oxidized reduced oxidized reduced

product/min/mg

(tl,2

acidity consistent

+O.l ml4 Cd+2

a remarkable

of

pK < 24.

The three criteria and tritium exchange--are

of the

@hydrogen

at C-4 of the ring.

progresses

degree

from

concerted

in histidine

to

As that

acidity

C-H/C-N

bond-

alone.

Examination of other 4-substituted in the hope of demonstrating a linear free

energy

the series.

REFERENCES 1. 2.

3. 4. 5. 6. 7. 8. 9. 10. 11.

Hanson, K. R., and Havir, E. A. (1972) in The Enzymes (Boyer, P. D., ed), 3rd Ed, Vol 7, pp 75-166, Academic Press, New York. Klee, C. B., Kirk, K. L., Cohen, L. A., and McPhie, P. (1975) J. Biol. Chem., 250, 5033-5040. Streitweiser, Jr., A., and Koch, H. F. (1964) J. Am. Chem. Sot., 86, 404-409. 4761-4763. Adolph, H. G., and Kamlet, M. J. (1966) J. Am. Chem. Sot., g, Weiss, C. (1972) Z. Chem., 12, 193-194. Tantz, W., Teitel, S., and Brossi, A. (1973) J. Med. Chem., 16, 705-707. Klee, C. B. (1972) J. Biol. Chem. 247, 1398-1406. Mehler, A. H., and Tabor, H. (1953) J. Biol. Chem., 201, 775-784. A. S., and Abeles, R. H. (1970) Fed. Proc., 29, Givot, I. L., Mildvan, 1590. Klee, C. B., Kirk, K. L., McPhie, P., and Cohen, L. A. (1974) Fed. Proc., 22, 1318. Cram, D. J. (1965) Fundamentals of Carbanion Chemistry, pp 52-55, Academic Press, New York.

348

4-Nitro-L-histidine as a substrate for histidine ammonia-lyase: the role of beta-hydrogen acidity in the rate-limiting step.

Vol. 87, No. 1, 1979 8lOC3iEMlCAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS March 15, 1979 Pages 343-348 4-NITRO-L-HISTIDINE AS A SUBSTRATE FOR HIS...
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